Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L38e

Term: IPR002675  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9730 SustainPine v2.0 831
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l38 6.16412e-40
Complete
sp_v2.0_unigene14960 SustainPine v2.0 736
AutoFact: putative translation releasing factor 2 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: high chlorophyll fluorescent 109 protein 0.0
N-terminus
sp_v2.0_unigene16289 SustainPine v2.0 898
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l38 1.86457e-38
Complete
sp_v2.0_unigene16451 SustainPine v2.0 850
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l38 7.61939e-40
Complete
sp_v2.0_unigene33942 SustainPine v2.0 937
AutoFact: high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana] gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] gb|AAM51328.1| putative translation r 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: peptide chain release factor 2 0.0
C-terminus
sp_v2.0_unigene50688 SustainPine v2.0 237
AutoFact: Calreticulin n=1 Tax=Polysphondylium pallidum RepID=D3BIF1_POLPA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 3.30653e-35
Internal
sp_v2.0_unigene76781 SustainPine v2.0 941
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 0.0
Internal
sp_v2.0_unigene81481 SustainPine v2.0 1258
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin precursor 0.0
N-terminus
sp_v2.0_unigene81564 SustainPine v2.0 856
AutoFact: Calreticulin domain containing protein 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene81672 SustainPine v2.0 701
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin precursor 0.0
N-terminus
sp_v2.0_unigene81694 SustainPine v2.0 579
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin 0.0
Internal
sp_v2.0_unigene81797 SustainPine v2.0 398
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 2.0e-40
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin 0.0
N-terminus
sp_v2.0_unigene82122 SustainPine v2.0 1253
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 0.0
Putative Complete
sp_v2.0_unigene82532 SustainPine v2.0 719
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 0.0
Internal
sp_v2.0_unigene82584 SustainPine v2.0 310
AutoFact: Putative calreticulin (Fragment) n=1 Tax=Phormium cookianum RepID=Q2TM91_9ASPA 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 3.04104e-37
Internal
sp_v2.0_unigene84920 SustainPine v2.0 593
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.11603e-19
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain