|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene41423
|
SustainPine v2.0
|
461
|
|
• AutoFact: NV19190; similar to pol polyprotein
|
6.0e-14
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_040966 [Vitis vinifera]
|
4.34763e-40
|
|
Putative N-terminus
|
|
sp_v2.0_unigene42712
|
SustainPine v2.0
|
484
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
4.2039e-45
|
|
Internal
|
|
sp_v2.0_unigene45778
|
SustainPine v2.0
|
426
|
|
• AutoFact: germin-like protein [Pinus sylvestris]
|
6.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: germin-like protein
|
1.87754e-40
|
|
N-terminus
|
|
sp_v2.0_unigene46605
|
SustainPine v2.0
|
893
|
|
• AutoFact: Auxin-binding protein ABP19a precursor, putative (EC:1.15.1.1)
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: germin-like protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene52074
|
SustainPine v2.0
|
268
|
|
• AutoFact: rve domain containing protein
|
8.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_040876 [Vitis vinifera]
|
9.56537e-25
|
|
Internal
|
|
sp_v2.0_unigene55110
|
SustainPine v2.0
|
415
|
|
• AutoFact: rve domain containing protein
|
2.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_010605 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene56280
|
SustainPine v2.0
|
246
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-28
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
1.43514e-35
|
|
Internal
|
|
sp_v2.0_unigene56919
|
SustainPine v2.0
|
446
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
2.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
4.42849e-39
|
|
Internal
|
|
sp_v2.0_unigene59381
|
SustainPine v2.0
|
636
|
|
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia sub-class
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene59509
|
SustainPine v2.0
|
790
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene60029
|
SustainPine v2.0
|
869
|
|
• AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB
|
0.0
|
|
• FL-Next: sp=Germin-like protein subfamily 2 member 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: germin-like protein 2-1-like
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene60061
|
SustainPine v2.0
|
472
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene60703
|
SustainPine v2.0
|
937
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSY8_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: germin-like protein 2-1-like
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene61861
|
SustainPine v2.0
|
618
|
|
• AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA
|
3.0e-30
|
|
• FL-Next: tr=Germin-like protein; Pinus caribaea.
|
0.0
|
|
• Blast2go: germin-like protein
|
4.66333e-32
|
|
C-terminus
|
|
sp_v2.0_unigene64657
|
SustainPine v2.0
|
500
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene65131
|
SustainPine v2.0
|
288
|
|
• AutoFact: RVT_2 domain containing protein
|
4.0e-26
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_028342 [Vitis vinifera]
|
1.91795e-25
|
|
Internal
|
|
sp_v2.0_unigene66756
|
SustainPine v2.0
|
350
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
2.0e-20
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
5.69106e-27
|
|
Internal
|
|
sp_v2.0_unigene74085
|
SustainPine v2.0
|
358
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-24
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
2.00223e-28
|
|
Internal
|
|
sp_v2.0_unigene77080
|
SustainPine v2.0
|
410
|
|
• AutoFact: rve domain containing protein
|
2.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
5.5838e-40
|
|
Internal
|
|
sp_v2.0_unigene78029
|
SustainPine v2.0
|
338
|
|
• AutoFact: RVT_2 domain containing protein
|
1.0e-21
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_032634 [Vitis vinifera]
|
7.78368e-24
|
|
Internal
|
