Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA-directed RNA polymerase, subunit 2, domain 6

Term: IPR007120  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene36660 SustainPine v2.0 833
AutoFact: putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana] dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor 8.40114e-33
Putative Complete
sp_v2.0_unigene36904 SustainPine v2.0 758
AutoFact: RNA polymerase II second largest subunit [Rhododendron macrophyllum] 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
N-terminus
sp_v2.0_unigene39714 SustainPine v2.0 334
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 3.0e-27
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: nuclear rna polymerase d2a 1.18154e-31
Internal
sp_v2.0_unigene40001 SustainPine v2.0 382
AutoFact: bHLH transcription factor PTF1-like [Oryza sativa Japonica Group] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.59978e-18
N-terminus
sp_v2.0_unigene40524 SustainPine v2.0 317
AutoFact: DNA-directed RNA polymerase n=4 Tax=Solanaceae RepID=Q1L5Z1_SOLLC 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Internal
sp_v2.0_unigene42407 SustainPine v2.0 402
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: dna-directed rna polymerase d subunit 2a-like 0.0
Internal
sp_v2.0_unigene49288 SustainPine v2.0 241
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8S1N7_SELML 3.0e-30
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: protein 1.00211e-35
Internal
sp_v2.0_unigene85216 SustainPine v2.0 724
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa2 2.02683e-23
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain