Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Intermediate filament protein, conserved site

Term: IPR018039  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene40161 SustainPine v2.0 1283
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase 0.0
Putative Complete
sp_v2.0_unigene48040 SustainPine v2.0 421
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.2039e-45
Internal
sp_v2.0_unigene50250 SustainPine v2.0 670
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase 0.0
N-terminus
sp_v2.0_unigene54915 SustainPine v2.0 228
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 3.67401e-30
Internal
sp_v2.0_unigene60467 SustainPine v2.0 1281
AutoFact: galactinol synthase 4 [Arabidopsis thaliana] gb|AAB71970.1| nearly identical to rice water stress induced protein gp|D26537|537404 [Arabidopsis thaliana] gb|AAY56403.1| At1g60470 [Arabidopsis thaliana] gb|AEE33692.1| galactinol synthase 4 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 1 0.0
Complete
sp_v2.0_unigene60672 SustainPine v2.0 672
AutoFact: galactinol synthase [Brassica napus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 1 0.0
C-terminus
sp_v2.0_unigene60986 SustainPine v2.0 675
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 0.0
C-terminus
sp_v2.0_unigene61377 SustainPine v2.0 1370
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 0.0
Complete
sp_v2.0_unigene61504 SustainPine v2.0 1065
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
C-terminus
sp_v2.0_unigene61696 SustainPine v2.0 1004
AutoFact: galactinol synthase [Brassica napus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 1 0.0
N-terminus
sp_v2.0_unigene62016 SustainPine v2.0 660
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 0.0
C-terminus
sp_v2.0_unigene62144 SustainPine v2.0 443
AutoFact: GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana] 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase exl3-like 0.0
Putative C-terminus
sp_v2.0_unigene62363 SustainPine v2.0 871
AutoFact: Helicase, C-terminal [Medicago truncatula] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 2.41298e-36
C-terminus
sp_v2.0_unigene62386 SustainPine v2.0 833
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SN62_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
N-terminus
sp_v2.0_unigene62861 SustainPine v2.0 545
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 1 0.0
Internal
sp_v2.0_unigene63155 SustainPine v2.0 638
AutoFact: galactinol synthase [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 0.0
Internal
sp_v2.0_unigene63211 SustainPine v2.0 412
AutoFact: Galactinol synthase n=2 Tax=Arabidopsis RepID=O22893_ARATH 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 1.45735e-43
Internal
sp_v2.0_unigene63638 SustainPine v2.0 994
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
C-terminus
sp_v2.0_unigene63886 SustainPine v2.0 725
AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene66558 SustainPine v2.0 369
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-30
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 8.94806e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain