Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Bromodomain, conserved site

Term: IPR018359  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene25805 SustainPine v2.0 2619
AutoFact: Bromodomain-containing protein n=1 Tax=Ricinus communis RepID=B9SV90_RICCO 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bromodomain-containing protein 2.4266e-39
C-terminus
sp_v2.0_unigene25911 SustainPine v2.0 877
AutoFact: chromatin complex subunit A101 [Zea mays] gb|AAL73042.1|AF461813_1 chromatin complex subunit A101 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
sp_v2.0_unigene26443 SustainPine v2.0 511
AutoFact: switch 2 [Arabidopsis thaliana] gb|AEE27606.1| switch 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 super family 0.0
Internal
sp_v2.0_unigene28282 SustainPine v2.0 1818
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative Complete
sp_v2.0_unigene30202 SustainPine v2.0 473
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 1.0e-38
FL-Next: tr=Bromodomain protein; subsp. trichocarpa). 0.0
Blast2go: bromodomain protein 5.25515e-40
Internal
sp_v2.0_unigene30318 SustainPine v2.0 471
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.30647e-19
N-terminus
sp_v2.0_unigene30762 SustainPine v2.0 707
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
sp_v2.0_unigene35289 SustainPine v2.0 622
AutoFact: ATP-dependent helicase BRM [Arabidopsis thaliana] sp|Q6EVK6.1|BRM_ARATH RecName: Full=ATP-dependent helicase BRM; Short=AtBRM; AltName: Full=Protein BRAHMA emb|CAG28313.1| putative SNF2 subfamily ATPase [Arabidopsis thaliana] gb|AEC10632.1| ATP-dependent 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase brm 0.0
N-terminus
sp_v2.0_unigene36813 SustainPine v2.0 563
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene37123 SustainPine v2.0 915
AutoFact: Bromodomain protein 103-like n=3 Tax=Oryza sativa RepID=Q69IM3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: bromodomain protein with a aaa atpase domain 0.0
Internal
sp_v2.0_unigene38083 SustainPine v2.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
Internal
sp_v2.0_unigene40138 SustainPine v2.0 167
AutoFact: ATP binding protein, putative (EC:3.6.4.3) 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: bromodomain protein 8.69985e-23
Internal
sp_v2.0_unigene42285 SustainPine v2.0 253
AutoFact: Transcription initiation factor TFIID, subunit TAF1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKZ9_PHYPA 5.0e-31
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription initiation factor subunit taf1 1.88563e-36
Internal
sp_v2.0_unigene42798 SustainPine v2.0 447
AutoFact: Bromodomain n=1 Tax=Medicago truncatula RepID=Q1SKV9_MEDTR 1.0e-23
FL-Next: tr=Bromodomain; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna-binding bromodomain-containing protein 7.15752e-29
Internal
sp_v2.0_unigene45513 SustainPine v2.0 492
AutoFact: Probable histone acetyltransferase HAC-like 1 n=4 Tax=Poaceae RepID=HACL1_ORYSJ 0.0
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
sp_v2.0_unigene47017 SustainPine v2.0 348
AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene50498 SustainPine v2.0 256
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 2.0e-14
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: bromodomain protein 1.29187e-15
Internal
sp_v2.0_unigene55801 SustainPine v2.0 352
AutoFact: Bromodomain protein n=1 Tax=Populus trichocarpa RepID=B9GQ03_POPTR 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bromodomain-containing protein 1.81363e-38
Putative C-terminus
sp_v2.0_unigene55952 SustainPine v2.0 281
AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 3.0e-13
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription initiation factor subunit taf1 1.75116e-14
Internal
sp_v2.0_unigene56152 SustainPine v2.0 526
AutoFact: DNA-binding bromodomain-containing protein [Arabidopsis thaliana] gb|AAF80635.1|AC069251_28 F2D10.15 [Arabidopsis thaliana] gb|ACI49787.1| At1g20670 [Arabidopsis thaliana] gb|AEE30002.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bromodomain protein 7.09593e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain