Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-CH-type

Term: IPR011016  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene35505 SustainPine v2.0 850
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAC06154.1| expressed protein [Arabidopsis thaliana] gb|AAO00741.1| Unknown protein [Arabidopsis thaliana] gb|AAP13386.1| At2g45530 [Arabidopsis thaliana] gb|AEC10566.1| RING/U-box domain-cont 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene35910 SustainPine v2.0 1172
AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: carbon catabolite repressor protein 4-like 3 0.0
C-terminus
sp_v2.0_unigene36090 SustainPine v2.0 750
AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene40522 SustainPine v2.0 505
AutoFact: SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] gb|AED98309.1| SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sec-c motif-containing protein otu-like cysteine protease family protein 2.17304e-35
N-terminus
sp_v2.0_unigene55849 SustainPine v2.0 544
AutoFact: 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Zea mays RepID=B6SHU3_MAIZE 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-hydroxyisobutyrate dehydrogenase 5.49347e-25
N-terminus
sp_v2.0_unigene57224 SustainPine v2.0 329
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_849790.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_001117462.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAF87887.1| 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene63941 SustainPine v2.0 501
AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaggy-related protein kinase gamma 7.74404e-28
Putative C-terminus
sp_v2.0_unigene67738 SustainPine v2.0 166
AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ring u-box domain-containing protein 2.0609e-19
Internal
sp_v2.0_unigene67955 SustainPine v2.0 499
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAC06154.1| expressed protein [Arabidopsis thaliana] gb|AAO00741.1| Unknown protein [Arabidopsis thaliana] gb|AAP13386.1| At2g45530 [Arabidopsis thaliana] gb|AEC10566.1| RING/U-box domain-cont 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.58268e-23
Internal
sp_v2.0_unigene69799 SustainPine v2.0 287
AutoFact: Shaggy-like kinase [Triticum aestivum] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 7.16768e-30
Internal
sp_v2.0_unigene73453 SustainPine v2.0 342
AutoFact: Membrane associated ring finger 1,8, putative n=1 Tax=Ricinus communis RepID=B9S8W6_RICCO 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane associated ring finger 1.77646e-17
C-terminus
sp_v2.0_unigene77147 SustainPine v2.0 817
AutoFact: zinc finger (C3HC4-type RING finger)protein-like [Oryza sativa Japonica Group] dbj|BAD37481.1| zinc finger (C3HC4-type RING finger)protein-like [Oryza sativa Japonica Group] 4.0e-11
FL-Next: tr=Ssm4 protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 4.83702e-13
C-terminus
sp_v2.0_unigene79577 SustainPine v2.0 698
AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene85887 SustainPine v2.0 854
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain