Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene28525 SustainPine v2.0 774
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB67676.1| putative protein [Arabidopsis thaliana] gb|AAM61020.1| unknown [Arabidopsis thaliana] gb|AEE79128.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene28533 SustainPine v2.0 1114
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
Complete
sp_v2.0_unigene28642 SustainPine v2.0 1357
AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Complete
sp_v2.0_unigene28705 SustainPine v2.0 1450
AutoFact: Protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRN0_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Putative C-terminus
sp_v2.0_unigene28717 SustainPine v2.0 1106
AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cleavage and polyadenylation specificity 0.0
C-terminus
sp_v2.0_unigene28740 SustainPine v2.0 703
AutoFact: tyrosine specific protein phosphatase family protein [Capsicum annuum] 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable tyrosine-protein phosphatase at1g05000-like 1.44228e-21
Putative C-terminus
sp_v2.0_unigene28741 SustainPine v2.0 1938
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene28754 SustainPine v2.0 1033
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene28792 SustainPine v2.0 1683
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_973461.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11603.1|AF424609_1 unknown protein [Arabidopsis thaliana] gb|AAM15000.1| Expressed protein [Arabidopsis thaliana 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene28810 SustainPine v2.0 1029
AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein 0.0
Complete
sp_v2.0_unigene28870 SustainPine v2.0 1568
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
C-terminus
sp_v2.0_unigene28900 SustainPine v2.0 265
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T628_RICCO 1.0e-24
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: zinc finger protein 6.20269e-29
Internal
sp_v2.0_unigene28925 SustainPine v2.0 599
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tnf receptor-associated factor 4 0.0
N-terminus
sp_v2.0_unigene28954 SustainPine v2.0 1443
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF64543.1| hypothetical protein [Arabidopsis thaliana] gb|AAT69207.1| hypothetical protein At3g05390 [Arabidopsis thaliana] gb|AEE74232.1| uncharacterized protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase domain-containing protein 0.0
C-terminus
sp_v2.0_unigene29018 SustainPine v2.0 379
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rfwd3-like 1.56826e-14
Internal
sp_v2.0_unigene29157 SustainPine v2.0 398
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat family protein protein kinase family protein 4.36878e-37
Internal
sp_v2.0_unigene29180 SustainPine v2.0 882
AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.92651e-41
Complete
sp_v2.0_unigene29239 SustainPine v2.0 626
AutoFact: UDP-glycosyltransferase 89B2 n=1 Tax=Stevia rebaudiana RepID=Q6VAA5_STERE 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-glucoronosyl udp-glucosyl transferase family protein 0.0
N-terminus
sp_v2.0_unigene29254 SustainPine v2.0 1946
AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.6633e-24
Putative Complete
sp_v2.0_unigene29292 SustainPine v2.0 1583
AutoFact: pfam05495, zf-CHY, CHY zinc finger 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain