Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene27211 SustainPine v2.0 2526
• AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42504.1| unknown protein [Arabidopsis thaliana] gb|ACN59279.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE36273.1| leucine-rich repeat protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable leucine-rich repeat receptor-like protein kinase at5g49770-like 0.0
Complete
sp_v2.0_unigene27218 SustainPine v2.0 813
• AutoFact: 3-hydroxyisobutyrate dehydrogenase-like protein [Arabidopsis thaliana] 6.0e-33
• FL-Next: sp=Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 3-hydroxyisobutyrate dehydrogenase 1.51548e-40
C-terminus
sp_v2.0_unigene27272 SustainPine v2.0 942
• AutoFact: BRH1 RING finger protein n=2 Tax=Arabidopsis RepID=Q9XF92_ARATH 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: brassinosteroid-responsive ring-h2 4.69402e-38
C-terminus
sp_v2.0_unigene27277 SustainPine v2.0 2215
• AutoFact: WS0374.C21_B21 SS-B-N-22 Picea sitchensis cDNA clone WS0374_B21 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene27395 SustainPine v2.0 1000
• AutoFact: IBR multi-domain protein 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
C-terminus
sp_v2.0_unigene27409 SustainPine v2.0 1935
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene27523 SustainPine v2.0 1512
• AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
Putative Complete
sp_v2.0_unigene27593 SustainPine v2.0 777
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene27881 SustainPine v2.0 439
• AutoFact: Putative zinc finger protein [Arabidopsis thaliana] 2.0e-11
• FL-Next: sp=Zinc finger CCCH domain-containing protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ring finger protein 5.94234e-28
Internal
sp_v2.0_unigene27891 SustainPine v2.0 1843
• AutoFact: Makorin-1, putative n=1 Tax=Ricinus communis RepID=B9SL96_RICCO 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ccch-type zinc finger protein c3h69 0.0
Complete
sp_v2.0_unigene27910 SustainPine v2.0 521
• AutoFact: Transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gb|AAM20342.1| unknown protein [Arabidopsis thaliana] gb|AEE81964.1| Transcription factor jumonji (jmjC) domain-cont 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: transcription factor jumonji domain-containing protein 0.0
Internal
sp_v2.0_unigene28033 SustainPine v2.0 473
• AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 0.0
Internal
sp_v2.0_unigene28045 SustainPine v2.0 467
• AutoFact: vacuolar protein sorting-associated protein 41-like protein [Arabidopsis thaliana] sp|P93043.3|VPS41_ARATH RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AEE28259.1| vacuolar protein sorting-associated protein 41-like protein [Ara 0.0
• FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
Internal
sp_v2.0_unigene28110 SustainPine v2.0 462
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 2.02548e-19
Putative C-terminus
sp_v2.0_unigene28181 SustainPine v2.0 934
• AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S1W6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable leucine-rich repeat receptor-like protein kinase at5g49770-like 0.0
Putative C-terminus
sp_v2.0_unigene28205 SustainPine v2.0 878
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 4.62428e-44
C-terminus
sp_v2.0_unigene28320 SustainPine v2.0 799
• AutoFact: putative protein phosphatase 2C 68 [Arabidopsis thaliana] ref|NP_001119181.1| putative protein phosphatase 2C 68 [Arabidopsis thaliana] sp|Q84JD5.1|P2C68_ARATH RecName: Full=Probable protein phosphatase 2C 68; Short=AtPP2C68 gb|AAO42197.1| putative protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 2c 68 0.0
Putative N-terminus
sp_v2.0_unigene28344 SustainPine v2.0 1018
• AutoFact: E3 ubiquitin-protein ligase ATL23 [Arabidopsis thaliana] sp|Q8L9W3.2|ATL23_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL23; AltName: Full=RING-H2 finger protein ATL23 dbj|BAB08453.1| unnamed protein product [Arabidopsis thaliana] gb|AAO41888.1| unkn 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase atl23 0.0
Putative Complete
sp_v2.0_unigene28364 SustainPine v2.0 1471
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
C-terminus
sp_v2.0_unigene28384 SustainPine v2.0 933
• AutoFact: [K] COG1678 Putative transcriptional regulator 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional regulator 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain