Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene25911 SustainPine v2.0 877
• AutoFact: chromatin complex subunit A101 [Zea mays] gb|AAL73042.1|AF461813_1 chromatin complex subunit A101 [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
sp_v2.0_unigene25990 SustainPine v2.0 1171
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 0.0
C-terminus
sp_v2.0_unigene26022 SustainPine v2.0 854
• AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: preprotein translocase seca-like protein 0.0
Internal
sp_v2.0_unigene26085 SustainPine v2.0 1386
• AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family-like protein 0.0
Complete
sp_v2.0_unigene26123 SustainPine v2.0 1947
• AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase prt1 0.0
Complete
sp_v2.0_unigene26167 SustainPine v2.0 879
• AutoFact: V-type proton ATPase subunit G 1 n=3 Tax=Solanaceae RepID=VATG1_TOBAC 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vacuolar atp synthase subunit g 0.0
Putative Complete
sp_v2.0_unigene26292 SustainPine v2.0 581
• AutoFact: YUCCA 9 protein [Arabidopsis thaliana] sp|O64489.1|YUC9_ARATH RecName: Full=Flavin-containing monooxygenase YUCCA9 gb|AAC16744.1| Contains similarity to myosin IB heavy chain gb|X70400 from Gallus gallus [Arabidopsis thaliana] gb|AEE27667.1| YUCCA 9 prote 5.0e-27
• FL-Next: sp=Flavin-containing monooxygenase YUCCA9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: flavine-containing monoxygenase 2.07685e-32
N-terminus
sp_v2.0_unigene26438 SustainPine v2.0 846
• AutoFact: E3 ubiquitin-protein ligase makorin [Arabidopsis thaliana] ref|NP_974255.1| E3 ubiquitin-protein ligase makorin [Arabidopsis thaliana] sp|Q6IDS6.1|C3H35_ARATH RecName: Full=E3 ubiquitin-protein ligase makorin; AltName: Full=Zinc finger CCCH domain-contain 4.0e-23
• FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: e3 ubiquitin-protein ligase makorin 9.26154e-36
C-terminus
sp_v2.0_unigene26503 SustainPine v2.0 2240
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
Complete
sp_v2.0_unigene26544 SustainPine v2.0 1033
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
Putative Complete
sp_v2.0_unigene26630 SustainPine v2.0 615
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene26694 SustainPine v2.0 621
• AutoFact: V-type proton ATPase subunit G n=1 Tax=Citrus limon RepID=VATG_CITLI 9.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vacuolar atp synthase subunit g 1.18655e-35
N-terminus
sp_v2.0_unigene26766 SustainPine v2.0 2460
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T2M9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene26870 SustainPine v2.0 1333
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB09677.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21185.1| At5g05830 [Arabidopsis thaliana] dbj|BAE99517.1| hypothetical protein [Arabidopsis thaliana] gb|AED90930.1| R 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Complete
sp_v2.0_unigene26955 SustainPine v2.0 906
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
C-terminus
sp_v2.0_unigene27068 SustainPine v2.0 737
• AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AEE79285.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene27094 SustainPine v2.0 704
• AutoFact: NBS [Pinus taeda] 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene27117 SustainPine v2.0 3452
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v2.0_unigene27163 SustainPine v2.0 1735
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: ring finger protein 0.0
Complete
sp_v2.0_unigene27180 SustainPine v2.0 869
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain