Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene23624 SustainPine v2.0 591
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11599.1|AF424605_1 AT4g31450/F3L17_20 [Arabidopsis thaliana] gb|AAN73297.1| At4g31450/F3L17_20 [Arabidopsis thaliana] gb|AEE85915.1| RING/U-box domain-containing protein [Arabidopsis thalia 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 1.94098e-31
Putative C-terminus
sp_v2.0_unigene23681 SustainPine v2.0 886
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
Putative C-terminus
sp_v2.0_unigene23770 SustainPine v2.0 1508
• AutoFact: DUF716 domain containing protein 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene23866 SustainPine v2.0 846
• AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 1.0e-21
• FL-Next: sp=E3 ubiquitin-protein ligase RHA1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 7.5849e-29
Complete
sp_v2.0_unigene23872 SustainPine v2.0 1410
• AutoFact: DUF716 domain containing protein 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene24140 SustainPine v2.0 1952
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 0.0
Complete
sp_v2.0_unigene24411 SustainPine v2.0 1161
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nbs lrr 0.0
Putative Complete
sp_v2.0_unigene24622 SustainPine v2.0 234
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 7.71394e-12
N-terminus
sp_v2.0_unigene24850 SustainPine v2.0 1081
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R739_RICCO 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene24985 SustainPine v2.0 1383
• AutoFact: ABI3-interacting protein 3 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF5_9CONI 8.0e-40
• FL-Next: tr=ABI3-interacting protein 3; Callitropsis nootkatensis. 0.0
• Blast2go: abi3-interacting protein 3 6.44597e-44
C-terminus
sp_v2.0_unigene25052 SustainPine v2.0 2616
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T0P2_RICCO 0.0
• FL-Next: sp=RING-H2 finger protein ATL40; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ring finger and transmembrane domain-containing protein 2-like 0.0
Putative Complete
sp_v2.0_unigene25117 SustainPine v2.0 2660
• AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyltransferase pmt3 0.0
Complete
sp_v2.0_unigene25128 SustainPine v2.0 1635
• AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family-like protein 0.0
Complete
sp_v2.0_unigene25426 SustainPine v2.0 851
• AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
C-terminus
sp_v2.0_unigene25462 SustainPine v2.0 756
• AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.27663e-40
N-terminus
sp_v2.0_unigene25527 SustainPine v2.0 609
• AutoFact: Ribosomal protein S8e family protein [Arabidopsis thaliana] dbj|BAB08958.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24082.1| unknown protein [Arabidopsis thaliana] gb|AAM45100.1| unknown protein [Arabidopsis thaliana] gb|AED91006.1| Ribosomal 6.0e-27
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ribosomal protein s8e family protein 7.41478e-34
C-terminus
sp_v2.0_unigene25741 SustainPine v2.0 2445
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 1.4013e-45
Complete
sp_v2.0_unigene25820 SustainPine v2.0 2303
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 2.45808e-31
Complete
sp_v2.0_unigene25847 SustainPine v2.0 945
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 7.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.58286e-35
N-terminus
sp_v2.0_unigene25887 SustainPine v2.0 1122
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain