Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: ABC-2 type transporter

Term: IPR013525  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene60709 SustainPine v2.0 862
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene61723 SustainPine v2.0 373
AutoFact: ABCG subfamily transporter n=2 Tax=Solanum tuberosum RepID=F5C1T7_SOLTU 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pdr-like abc transporter 4.54712e-30
Internal
sp_v2.0_unigene62390 SustainPine v2.0 1245
AutoFact: Pleiotropic drug resistance protein 1 n=1 Tax=Nicotiana plumbaginifolia RepID=PDR1_NICPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 0.0
Putative Complete
sp_v2.0_unigene62931 SustainPine v2.0 466
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v2.0_unigene63771 SustainPine v2.0 578
AutoFact: ABC transporter G family member 32 [Arabidopsis thaliana] sp|O81016.1|AB32G_ARATH RecName: Full=ABC transporter G family member 32; Short=ABC transporter ABCG.32; Short=AtABCG32; AltName: Full=Probable pleiotropic drug resistance protein 4 gb|AAC32236.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
N-terminus
sp_v2.0_unigene64084 SustainPine v2.0 814
AutoFact: RecName: Full=Pleiotropic drug resistance protein 4 emb|CAD59569.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00887.1| TPA_exp: PDR4 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 2-like 0.0
N-terminus
sp_v2.0_unigene64835 SustainPine v2.0 448
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: disease resistance protein 1.14123e-36
C-terminus
sp_v2.0_unigene65303 SustainPine v2.0 460
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8S2N6_SELML 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 6.3871e-36
Putative C-terminus
sp_v2.0_unigene65820 SustainPine v2.0 470
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SMW2_RICCO 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 0.0
N-terminus
sp_v2.0_unigene66274 SustainPine v2.0 492
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8SJZ1_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Putative C-terminus
sp_v2.0_unigene67043 SustainPine v2.0 268
AutoFact: ABC transporter [Gossypium hirsutum] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 1.86708e-18
Internal
sp_v2.0_unigene67593 SustainPine v2.0 344
AutoFact: Probable pleiotropic drug resistance protein 1 n=6 Tax=Oryza sativa RepID=PDR1_ORYSJ 2.0e-40
FL-Next: sp=Probable pleiotropic drug resistance protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: pleiotropic drug resistance protein 1-like 0.0
Internal
sp_v2.0_unigene67905 SustainPine v2.0 647
AutoFact: PDR-like ABC-transporter n=1 Tax=Glycine max RepID=Q1M2R7_SOYBN 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 2.97757e-39
C-terminus
sp_v2.0_unigene68025 SustainPine v2.0 409
AutoFact: Putative pleiotropic drug resistance protein 7 n=6 Tax=Poaceae RepID=PDR7_ORYSJ 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 4.47492e-17
N-terminus
sp_v2.0_unigene69702 SustainPine v2.0 375
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ6_RICCO 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 4.2039e-45
Internal
sp_v2.0_unigene69867 SustainPine v2.0 339
AutoFact: pfam01061, ABC2_membrane, ABC-2 type transporter 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 4.71234e-27
Internal
sp_v2.0_unigene70448 SustainPine v2.0 599
AutoFact: Glycosyltransferase UGT72B9 n=1 Tax=Maclura pomifera RepID=A1YGR2_MACPO 8.00001e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroquinone glucosyltransferase-like 0.0
Internal
sp_v2.0_unigene71525 SustainPine v2.0 361
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SMW2_RICCO 1.0e-36
FL-Next: sp=Putative pleiotropic drug resistance protein 7; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: atp-binding cassette 1.9203e-36
Internal
sp_v2.0_unigene72153 SustainPine v2.0 323
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.1108e-37
Internal
sp_v2.0_unigene72211 SustainPine v2.0 425
AutoFact: ABC transporter family, pleiotropic drug resistance protein n=1 Tax=Populus trichocarpa RepID=B9GGM3_POPTR 0.0
FL-Next: sp=Pleiotropic drug resistance protein TUR2; Spirodela polyrrhiza (Giant duckweed). 0.0
Blast2go: pleiotropic drug resistance protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain