Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: ABC-2 type transporter

Term: IPR013525  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene39819 SustainPine v2.0 484
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RQF2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 0.0
Internal
sp_v2.0_unigene39946 SustainPine v2.0 382
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RQF2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 0.0
Internal
sp_v2.0_unigene40141 SustainPine v2.0 570
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RGY6_SELML 1.00053e-42
FL-Next: sp=Putative white-brown complex homolog protein 30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter g family member 28-like 0.0
C-terminus
sp_v2.0_unigene40857 SustainPine v2.0 520
AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 2 emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00885.1| TPA_exp: PDR2 ABC transporter [Oryza sativa (japonica cultivar-group)] 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 1-like 5.5774e-22
Putative N-terminus
sp_v2.0_unigene41642 SustainPine v2.0 853
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
sp_v2.0_unigene41705 SustainPine v2.0 278
AutoFact: Unassigned protein 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.0355e-36
Internal
sp_v2.0_unigene42414 SustainPine v2.0 560
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.18061e-35
Putative C-terminus
sp_v2.0_unigene42554 SustainPine v2.0 422
AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 2 emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00885.1| TPA_exp: PDR2 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 0.0
Putative N-terminus
sp_v2.0_unigene42709 SustainPine v2.0 434
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RQF2_RICCO 1.0e-12
FL-Next: Isoform 2 of Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 0.0
Blast2go: atp-binding cassette 5.49827e-14
Internal
sp_v2.0_unigene43252 SustainPine v2.0 531
AutoFact: ABC transporter G family member 22 [Arabidopsis thaliana] ref|NP_850781.2| ABC transporter G family member 22 [Arabidopsis thaliana] sp|Q93YS4.1|AB22G_ARATH RecName: Full=ABC transporter G family member 22; Short=ABC transporter ABCG.22; Short=AtABCG22; A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 22 0.0
Internal
sp_v2.0_unigene43463 SustainPine v2.0 589
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
sp_v2.0_unigene44114 SustainPine v2.0 630
AutoFact: PDR-type ABC transporter 9 [Oryza sativa Indica Group] 0.0001
FL-Next: sp=Pleiotropic drug resistance protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v2.0_unigene44552 SustainPine v2.0 295
AutoFact: ABC transporter G family member 14 n=3 Tax=Brassicaceae RepID=AB14G_ARATH 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 14-like 1.32695e-15
Internal
sp_v2.0_unigene48685 SustainPine v2.0 675
AutoFact: ABC transporter G family member 7 n=4 Tax=Arabidopsis RepID=AB7G_ARATH 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 5.83878e-26
Internal
sp_v2.0_unigene49157 SustainPine v2.0 455
AutoFact: Pleiotropic drug resistance protein n=1 Tax=Cucumis sativus RepID=C8CA12_CUCSA 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 3.32052e-41
Putative N-terminus
sp_v2.0_unigene49218 SustainPine v2.0 426
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RQF0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g15210-like protein 0.0
Internal
sp_v2.0_unigene49242 SustainPine v2.0 649
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RGW5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 0.0
Internal
sp_v2.0_unigene49267 SustainPine v2.0 455
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SGV3_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 3.9475e-37
Internal
sp_v2.0_unigene49368 SustainPine v2.0 439
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RLA2_SELML 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Putative N-terminus
sp_v2.0_unigene49380 SustainPine v2.0 434
AutoFact: White-brown-complex ABC transporter family n=2 Tax=Populus trichocarpa RepID=B9IIG9_POPTR 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 22 1.19941e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain