Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene41817 SustainPine v2.0 706
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 2.0e-33
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate receptor -like 1.33196e-38
N-terminus
sp_v2.0_unigene42822 SustainPine v2.0 478
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene43173 SustainPine v2.0 347
AutoFact: Leucine-rich repeat receptor protein kinase EXS, putative n=1 Tax=Ricinus communis RepID=B9SVV1_RICCO 3.0e-26
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase gso1-like 2.59388e-29
Internal
sp_v2.0_unigene43921 SustainPine v2.0 353
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene44669 SustainPine v2.0 185
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SGA4_RICCO 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xylem serine proteinase 1 8.63455e-21
Internal
sp_v2.0_unigene44798 SustainPine v2.0 252
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGH2.2|Y1561_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56130; Flags: Precursor gb|AEE33347.1| putative LRR receptor-like serine 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat family protein 6.63221e-16
Putative C-terminus
sp_v2.0_unigene44911 SustainPine v2.0 603
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 1.99965e-42
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 20-like 0.0
C-terminus
sp_v2.0_unigene45036 SustainPine v2.0 229
AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ref4-related 1 protein 2.28594e-15
Internal
sp_v2.0_unigene45407 SustainPine v2.0 543
AutoFact: ABC transporter B family member 20 [Arabidopsis thaliana] sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC transporter B family member 20; Short=ABC transporter ABCB.20; Short=AtABCB20; AltName: Full=Multidrug resistance protein 14; AltName: Full=P-glycoprotein 1.0e-09
FL-Next: sp=ABC transporter B family member 20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 4.64349e-12
N-terminus
sp_v2.0_unigene46873 SustainPine v2.0 202
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-19
FL-Next: sp=Glutamate receptor 3.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 1.13057e-23
Internal
sp_v2.0_unigene47318 SustainPine v2.0 456
AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-rich receptor-like protein kinase 42-like 0.0
Internal
sp_v2.0_unigene47876 SustainPine v2.0 622
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1270; Flags: Precursor dbj|BAB02023.1| un 1.0e-20
FL-Next: sp=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 4.03955e-22
Internal
sp_v2.0_unigene48558 SustainPine v2.0 485
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9T4J8_RICCO 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
sp_v2.0_unigene48680 SustainPine v2.0 632
AutoFact: Subtilisin-like protease n=3 Tax=Andropogoneae RepID=B6U0R8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Internal
sp_v2.0_unigene48687 SustainPine v2.0 316
AutoFact: Glutamate receptor 3.2 n=2 Tax=Arabidopsis RepID=GLR32_ARATH 1.0e-23
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 2.30244e-23
Internal
sp_v2.0_unigene49741 SustainPine v2.0 208
AutoFact: ABC transporter B family member 6 [Arabidopsis thaliana] sp|Q8LPT1.2|AB6B_ARATH RecName: Full=ABC transporter B family member 6; Short=ABC transporter ABCB.6; Short=AtABCB6; AltName: Full=Multidrug resistance protein 6; AltName: Full=P-glycoprotein 6 gb|A 7.0e-23
FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter b family member 20-like 2.89007e-27
Internal
sp_v2.0_unigene50040 SustainPine v2.0 364
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 3.0e-35
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 6.9056e-42
Internal
sp_v2.0_unigene51247 SustainPine v2.0 301
AutoFact: PsaG, PSI-G, subunit V, photosystem I polypeptide n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RX32_OSTLU 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: photosystem i reaction center subunit v 2.1332e-13
Internal
sp_v2.0_unigene51391 SustainPine v2.0 325
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 2.0e-33
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 5.51218e-39
Internal
sp_v2.0_unigene52131 SustainPine v2.0 452
AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 7.0e-31
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase tdr-like 2.64077e-37
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain