Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene18696 SustainPine v2.0 727
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RLM4_RICCO 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Putative N-terminus
sp_v2.0_unigene18766 SustainPine v2.0 581
AutoFact: NXRV075_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV075_D04 5' similar to Arabidopsis thaliana sequence At1g37110 see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_011062 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene19062 SustainPine v2.0 1510
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9T062_RICCO 0.0
FL-Next: tr=Cinnamoyl-CoA reductase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: cinnamoyl- reductase 0.0
Complete
sp_v2.0_unigene19404 SustainPine v2.0 1839
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 9.55056e-32
Putative Complete
sp_v2.0_unigene19789 SustainPine v2.0 2865
AutoFact: PTEN-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Phosphoprotein phosphatase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: phosphatidylinositol- -trisphosphate 3-phosphatase 0.0
Complete
sp_v2.0_unigene19863 SustainPine v2.0 578
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
sp_v2.0_unigene20029 SustainPine v2.0 352
AutoFact: Polynucleotidyl transferase, Ribonuclease H fold (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q4N7_MEDTR 1.0e-22
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.03831e-26
Internal
sp_v2.0_unigene20139 SustainPine v2.0 277
AutoFact: NXRV123_F01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV123_F01 5' similar to Arabidopsis thaliana sequence At2g15410 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100249206 9.7425e-24
Putative N-terminus
sp_v2.0_unigene20280 SustainPine v2.0 615
AutoFact: putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gb|AAL90901.1| AT5g20250/F5O24_140 [Arabidopsis thaliana] gb|AAN18198.1| At5g20250/F5O24_140 [Arabidopsis thaliana] dbj|BAE99252.1| seed imbitition protein-like [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol--sucrose galactosyltransferase 6 0.0
N-terminus
sp_v2.0_unigene20540 SustainPine v2.0 405
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q53K71_ORYSJ 3.0e-18
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.83155e-21
Putative N-terminus
sp_v2.0_unigene20629 SustainPine v2.0 895
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Cationic amino acid transporter; subsp. trichocarpa). 0.0
Blast2go: cationic amino acid transporter 0.0
N-terminus
sp_v2.0_unigene20661 SustainPine v2.0 1422
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T8H0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene20747 SustainPine v2.0 319
AutoFact: sphingosine kinase [Lotus japonicus] 2.0e-18
FL-Next: sp=Sphingoid long-chain bases kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sphingoid long-chain bases kinase 1-like 3.94097e-19
Internal
sp_v2.0_unigene20758 SustainPine v2.0 1130
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9SKV5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase 0.0
Complete
sp_v2.0_unigene20780 SustainPine v2.0 1297
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene20851 SustainPine v2.0 693
AutoFact: Cytochrome c oxidase subunit 2 (Fragment) n=2 Tax=Magnoliophyta RepID=B5LYM7_ESCCA 2.0e-09
FL-Next: sp=Cytochrome c oxidase subunit 2; Beta vulgaris (Sugar beet). Mitochondrion. 0.0
Blast2go: cytochrome c oxidase subunit 2 8.20941e-13
Putative C-terminus
sp_v2.0_unigene21123 SustainPine v2.0 2218
AutoFact: Oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SFV3_RICCO 0.0
FL-Next: sp=Uncharacterized PKHD-type hydroxylase At1g22950; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
Complete
sp_v2.0_unigene21331 SustainPine v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_016106 [Vitis vinifera] 1.64214e-16
Putative N-terminus
sp_v2.0_unigene21695 SustainPine v2.0 599
AutoFact: putative serine/threonine protein kinase [Oryza sativa Japonica Group] dbj|BAD87917.1| putative serine/threonine protein kinase [Oryza sativa Japonica Group] 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase 0.0
C-terminus
sp_v2.0_unigene21795 SustainPine v2.0 1279
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RQR6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calmodulin binding 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain