Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Retrotransposon gag protein

Term: IPR005162  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene77680 SustainPine v2.0 583
AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ 1.4013e-45
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene77819 SustainPine v2.0 339
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 4.0e-34
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 4.92852e-35
Putative C-terminus
sp_v2.0_unigene78085 SustainPine v2.0 348
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 8.0e-27
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 5.06301e-31
Internal
sp_v2.0_unigene78117 SustainPine v2.0 461
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_007301 [Vitis vinifera] 3.59662e-25
C-terminus
sp_v2.0_unigene78275 SustainPine v2.0 355
AutoFact: Beta-galactosidase n=1 Tax=Persea americana RepID=Q0EDB0_PERAE 1.0e-16
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta galactosidase 9 2.84522e-19
Putative C-terminus
sp_v2.0_unigene78324 SustainPine v2.0 402
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 7.0e-26
FL-Next: tr=Mutant gag-pol polyprotein; Pisum sativum (Garden pea). 0.0
Blast2go: gag-pol polyprotein 1.71882e-32
Putative C-terminus
sp_v2.0_unigene78752 SustainPine v2.0 568
AutoFact: Putative cytochrome P450 (Fragment) n=1 Tax=Populus tremula x Populus alba RepID=Q8H224_POPCN 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene78924 SustainPine v2.0 404
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60ET2_ORYSJ 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene79072 SustainPine v2.0 579
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SSS7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: map kinase-like protein 0.0
Internal
sp_v2.0_unigene79275 SustainPine v2.0 535
AutoFact: putative cytochrome P450 [Populus tremula x Populus alba] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene79436 SustainPine v2.0 1232
AutoFact: vesicle associated protein [Arabidopsis thaliana] gb|AEE80088.1| vesicle associated protein [Arabidopsis thaliana] 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene79448 SustainPine v2.0 759
AutoFact: pleckstrin homology and lipid-binding START domain-containing protein [Arabidopsis thaliana] gb|AAL57642.1| AT5g45560/MFC19_23 [Arabidopsis thaliana] gb|AED95268.1| pleckstrin homology and lipid-binding START domain-containing protein [Arabidopsis thalian 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.54826e-28
Putative C-terminus
sp_v2.0_unigene79459 SustainPine v2.0 374
AutoFact: Cf-2.1 n=3 Tax=Solanum pimpinellifolium RepID=Q41397_SOLPI 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hcr2- 6.93123e-31
Internal
sp_v2.0_unigene79769 SustainPine v2.0 386
AutoFact: Cytochrome P450 n=1 Tax=Panax notoginseng RepID=F4YF79_9APIA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flavonoid 3 -monooxygenase-like 0.0
Internal
sp_v2.0_unigene79911 SustainPine v2.0 631
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene80115 SustainPine v2.0 1048
AutoFact: putative VAMP-associated protein [Arabidopsis thaliana] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.75075e-36
Putative Complete
sp_v2.0_unigene80413 SustainPine v2.0 461
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PTP5_PICSI 7.0e-21
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 1.06231e-26
Complete
sp_v2.0_unigene81316 SustainPine v2.0 462
AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 3.0e-36
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 0.0
C-terminus
sp_v2.0_unigene81599 SustainPine v2.0 320
AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 2.0e-26
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 3.47117e-28
C-terminus
sp_v2.0_unigene81836 SustainPine v2.0 275
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 8.54792e-44
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain