Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene63778 SustainPine v2.0 683
AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase-like protein 2.158e-43
Putative C-terminus
sp_v2.0_unigene64558 SustainPine v2.0 439
AutoFact: RCC1 domain containing protein 7.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rcc1 and btb domain-containing protein 9.19784e-25
Internal
sp_v2.0_unigene66367 SustainPine v2.0 470
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Blast2go: pectin methylesterase 0.0
Internal
sp_v2.0_unigene67217 SustainPine v2.0 474
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 12-like 0.0
Internal
sp_v2.0_unigene68297 SustainPine v2.0 340
AutoFact: Detoxifying efflux carrier 35 n=5 Tax=Arabidopsis RepID=F4JTB2_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: detoxifying efflux carrier 35 9.09795e-26
C-terminus
sp_v2.0_unigene71819 SustainPine v2.0 331
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 4.06377e-44
Internal
sp_v2.0_unigene76821 SustainPine v2.0 825
AutoFact: polygalacturonase precursor [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
sp_v2.0_unigene77181 SustainPine v2.0 887
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
C-terminus
sp_v2.0_unigene79446 SustainPine v2.0 1345
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100244219 1.19895e-40
Putative C-terminus
sp_v2.0_unigene85785 SustainPine v2.0 955
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
C-terminus
sp_v2.0_unigene91337 SustainPine v2.0 913
AutoFact: Amino acid transporter, putative n=1 Tax=Ricinus communis RepID=B9RBN4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine histidine transporter 1 0.0
N-terminus
sp_v2.0_unigene91744 SustainPine v2.0 339
AutoFact: early-responsive to dehydration stress-related protein [Arabidopsis thaliana] dbj|BAB02357.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76531.1| early-responsive to dehydration stress-related protein [Arabidopsis thaliana] 8.0e-30
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: uncharacterized membrane 5.7808e-36
N-terminus
sp_v2.0_unigene92320 SustainPine v2.0 1831
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain