Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene35271 SustainPine v2.0 992
AutoFact: U3 small nucleolar RNA-associated protein, putative n=1 Tax=Ricinus communis RepID=B9S245_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin beta-like protein 3-like 0.0
Internal
sp_v2.0_unigene36176 SustainPine v2.0 675
AutoFact: early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG23449.1|AC084165_15 hypothetical protein [Arabidopsis thaliana] dbj|BAF01245.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31435.1| early-responsive to dehydration s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: early-responsive to dehydration stress protein 0.0
N-terminus
sp_v2.0_unigene36418 SustainPine v2.0 980
AutoFact: Glycoside hydrolase, family 28 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Internal
sp_v2.0_unigene37594 SustainPine v2.0 280
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 4.6929e-13
Internal
sp_v2.0_unigene38108 SustainPine v2.0 432
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9RXM3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mate efflux domain-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene38485 SustainPine v2.0 395
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R7N6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 12-like 0.0
Internal
sp_v2.0_unigene39636 SustainPine v2.0 1116
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
Internal
sp_v2.0_unigene40261 SustainPine v2.0 380
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RZX1_RICCO 6.0e-20
FL-Next: tr=Allergen Cry j 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: polygalacturonase at1g48100-like 4.59099e-23
Putative N-terminus
sp_v2.0_unigene40430 SustainPine v2.0 294
AutoFact: U3 small nucleolar RNA-associated protein, putative n=1 Tax=Ricinus communis RepID=B9S245_RICCO 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin beta-like protein 3-like 3.51952e-34
Internal
sp_v2.0_unigene41410 SustainPine v2.0 853
AutoFact: 80 kD MCM3-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RSV1_RICCO 0.0
FL-Next: tr=80 kD MCM3-associated protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: g1121 protein 0.0
Internal
sp_v2.0_unigene43752 SustainPine v2.0 463
AutoFact: Ribosome-binding factor A, putative n=1 Tax=Ricinus communis RepID=B9RG62_RICCO 1.0e-13
FL-Next: sp=Probable ribosome-binding factor A, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosome-binding factor a 1.92286e-14
Internal
sp_v2.0_unigene46510 SustainPine v2.0 442
AutoFact: Polygalacturonase n=2 Tax=Cucumis RepID=E5GBI5_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene49662 SustainPine v2.0 421
AutoFact: Sucrose transporter n=1 Tax=Vitis vinifera RepID=Q8W534_VITVI 2.0e-32
FL-Next: sp=Sucrose transport protein; Spinacia oleracea (Spinach). 0.0
Blast2go: sucrose transporter 3.57611e-42
Putative N-terminus
sp_v2.0_unigene57371 SustainPine v2.0 573
AutoFact: ripening regulated protein DDTFR18 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Internal
sp_v2.0_unigene59952 SustainPine v2.0 846
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAD46034.1|AC007519_19 F16N3.20 [Arabidopsis thaliana] gb|AEE32181.1| MATE efflux family protein [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 12-like 0.0
Putative N-terminus
sp_v2.0_unigene60155 SustainPine v2.0 1662
AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Complete
sp_v2.0_unigene60229 SustainPine v2.0 637
AutoFact: polygalacturonase [Arabidopsis thaliana] gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene60916 SustainPine v2.0 773
AutoFact: putative cinnamoyl CoA reductase [Arabidopsis thaliana] 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional dihydroflavonol 4-reductase flavanone 4-reductase-like 0.0
Putative N-terminus
sp_v2.0_unigene61135 SustainPine v2.0 742
AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene63753 SustainPine v2.0 807
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain