Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene19367 SustainPine v2.0 1991
AutoFact: histidine amino acid transporter [Oryza sativa Indica Group] 0.0
FL-Next: sp=Lysine histidine transporter 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine histidine transporter 1-like 0.0
Complete
sp_v2.0_unigene19620 SustainPine v2.0 510
AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.22869e-33
Internal
sp_v2.0_unigene20224 SustainPine v2.0 1416
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
sp_v2.0_unigene21276 SustainPine v2.0 863
AutoFact: sucrose carrier [Ricinus communis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene22597 SustainPine v2.0 1362
AutoFact: polygalacturonase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
sp_v2.0_unigene25804 SustainPine v2.0 773
AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
N-terminus
sp_v2.0_unigene26781 SustainPine v2.0 1332
AutoFact: Sucrose transporter n=5 Tax=Vitis vinifera RepID=E3VWT2_VITVI 0.0
FL-Next: sp=Sucrose transport protein SUT4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: sucrose transporter-like protein 0.0
Putative N-terminus
sp_v2.0_unigene27022 SustainPine v2.0 1507
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 41-like 0.0
Putative C-terminus
sp_v2.0_unigene27976 SustainPine v2.0 444
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Internal
sp_v2.0_unigene28310 SustainPine v2.0 678
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9SPK5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mate efflux family protein 0.0
N-terminus
sp_v2.0_unigene29613 SustainPine v2.0 715
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
C-terminus
sp_v2.0_unigene29674 SustainPine v2.0 1115
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin beta-like protein 3-like 0.0
N-terminus
sp_v2.0_unigene30279 SustainPine v2.0 551
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: wd40-repeat protein 1.06729e-18
Internal
sp_v2.0_unigene30415 SustainPine v2.0 486
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AEE30369.1| MATE efflux family protein [Arabidopsis thaliana] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mate efflux family protein 1.44256e-38
C-terminus
sp_v2.0_unigene30789 SustainPine v2.0 339
AutoFact: early-responsive to dehydration stress-related protein [Arabidopsis thaliana] dbj|BAB02357.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76531.1| early-responsive to dehydration stress-related protein [Arabidopsis thaliana] 1.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: early-responsive to dehydration stress-related protein 1.23098e-31
N-terminus
sp_v2.0_unigene30863 SustainPine v2.0 778
AutoFact: ripening regulated protein DDTFR18 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Internal
sp_v2.0_unigene32192 SustainPine v2.0 719
AutoFact: Integral membrane protein, putative n=4 Tax=Brassicaceae RepID=Q8LPI3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 protein 0.0
Internal
sp_v2.0_unigene32295 SustainPine v2.0 309
AutoFact: Multidrug resistance pump, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9RSJ7_RICCO 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 4.28657e-42
Internal
sp_v2.0_unigene33216 SustainPine v2.0 826
AutoFact: early-responsive to dehydration stress-related protein [Arabidopsis thaliana] dbj|BAB02357.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76531.1| early-responsive to dehydration stress-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane 0.0
N-terminus
sp_v2.0_unigene34807 SustainPine v2.0 1039
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase-like protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain