Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5522 SustainPine v2.0 1251
AutoFact: polygalacturonase [Arabidopsis thaliana] sp|Q949Z1.1|PGLR4_ARATH RecName: Full=Polygalacturonase At1g48100; Short=PG; AltName: Full=Pectinase At1g48100; Flags: Precursor gb|AAK92733.1| putative polygalacturonase PG1 [Arabidopsis thaliana] gb|AAM20001.1| p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
sp_v2.0_unigene5933 SustainPine v2.0 1396
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PST8_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectinesterase inhibitor 0.0
C-terminus
sp_v2.0_unigene6064 SustainPine v2.0 1892
AutoFact: Sucrose transporter-like protein n=4 Tax=Solanum RepID=Q7Y1Q0_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sucrose transporter-like protein 0.0
Complete
sp_v2.0_unigene6159 SustainPine v2.0 1060
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
C-terminus
sp_v2.0_unigene6930 SustainPine v2.0 1537
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R7N6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
C-terminus
sp_v2.0_unigene7742 SustainPine v2.0 1048
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase-like protein 0.0
C-terminus
sp_v2.0_unigene8418 SustainPine v2.0 870
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB09065.1| unnamed protein product [Arabidopsis thaliana] gb|AED95052.1| mate efflux domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mate efflux domain-containing protein 0.0
N-terminus
sp_v2.0_unigene9896 SustainPine v2.0 1627
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
C-terminus
sp_v2.0_unigene10303 SustainPine v2.0 758
AutoFact: Protein pim1, putative n=1 Tax=Ricinus communis RepID=B9SIV0_RICCO 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene10416 SustainPine v2.0 761
AutoFact: Lysine/histidine transporter n=2 Tax=Populus trichocarpa RepID=B9HJ04_POPTR 4.0e-31
FL-Next: sp=Lysine histidine transporter-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine histidine transporter 1.95297e-32
C-terminus
sp_v2.0_unigene11763 SustainPine v2.0 729
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
C-terminus
sp_v2.0_unigene12177 SustainPine v2.0 434
AutoFact: polygalacturonase [Citrus sinensis] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Internal
sp_v2.0_unigene12916 SustainPine v2.0 437
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] emb|CAA66809.1| hypothetical protein [Arabidopsis thaliana] dbj|BAB01841.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15295.1| AT3g26590/MFE16_11 [Arabidopsis thaliana] gb|AAN73299.1| 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
N-terminus
sp_v2.0_unigene13133 SustainPine v2.0 750
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 12-like 0.0
C-terminus
sp_v2.0_unigene14793 SustainPine v2.0 2042
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
Complete
sp_v2.0_unigene14996 SustainPine v2.0 1716
AutoFact: histidine amino acid transporter [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine histidine transporter 1-like 0.0
Complete
sp_v2.0_unigene15279 SustainPine v2.0 716
AutoFact: polygalacturonase [Persea americana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Putative C-terminus
sp_v2.0_unigene17376 SustainPine v2.0 1838
AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Complete
sp_v2.0_unigene18919 SustainPine v2.0 637
AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B0L3S3_9CONI 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Blast2go: pectinesterase 0.0
C-terminus
sp_v2.0_unigene19152 SustainPine v2.0 388
AutoFact: MatE domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 1.82448e-21
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain