Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene54992 SustainPine v2.0 368
AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.66247e-44
Internal
sp_v2.0_unigene55168 SustainPine v2.0 496
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SS70_RICCO 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene56035 SustainPine v2.0 679
AutoFact: GQ0167.B3_D01 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0167_D01 5', mRNA sequence. 5.0e-24
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.37694e-17
Internal
sp_v2.0_unigene57857 SustainPine v2.0 570
AutoFact: putative protein kinase Xa21 [Oryza sativa Japonica Group] gb|EAZ37493.1| hypothetical protein OsJ_21827 [Oryza sativa Japonica Group] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 3.8811e-32
N-terminus
sp_v2.0_unigene58389 SustainPine v2.0 186
AutoFact: Polygalacturonase n=1 Tax=Zea mays RepID=B6T9E6_MAIZE 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycoside hydrolase family 28 expressed 8.58799e-31
Internal
sp_v2.0_unigene59094 SustainPine v2.0 227
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.35919e-28
Internal
sp_v2.0_unigene59381 SustainPine v2.0 636
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia sub-class 0.0
Internal
sp_v2.0_unigene60155 SustainPine v2.0 1662
AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Complete
sp_v2.0_unigene60212 SustainPine v2.0 620
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9P2L6_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 68-like 0.0
C-terminus
sp_v2.0_unigene60229 SustainPine v2.0 637
AutoFact: polygalacturonase [Arabidopsis thaliana] gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene60873 SustainPine v2.0 821
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
Internal
sp_v2.0_unigene61234 SustainPine v2.0 759
AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
N-terminus
sp_v2.0_unigene61976 SustainPine v2.0 863
AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
C-terminus
sp_v2.0_unigene62006 SustainPine v2.0 230
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.24399e-22
C-terminus
sp_v2.0_unigene62627 SustainPine v2.0 558
AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
Putative N-terminus
sp_v2.0_unigene62684 SustainPine v2.0 724
AutoFact: pectate lyase [Gossypium hirsutum] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
C-terminus
sp_v2.0_unigene62801 SustainPine v2.0 848
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
C-terminus
sp_v2.0_unigene62856 SustainPine v2.0 945
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
Putative N-terminus
sp_v2.0_unigene63252 SustainPine v2.0 552
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.32e-23
Putative N-terminus
sp_v2.0_unigene63416 SustainPine v2.0 485
AutoFact: pectate lyase [Gossypium hirsutum] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 5.76235e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain