Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene43088 SustainPine v2.0 341
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9SSX3_RICCO 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endo-polygalacturonase 1.71419e-38
Internal
sp_v2.0_unigene44294 SustainPine v2.0 374
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.83703e-08
N-terminus
sp_v2.0_unigene44776 SustainPine v2.0 534
AutoFact: receptor kinase 1 [Triticum aestivum] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 6.19186e-39
Internal
sp_v2.0_unigene45074 SustainPine v2.0 259
AutoFact: Pectate lyase (Fragment) n=3 Tax=Musa acuminata RepID=Q8RVQ3_MUSAC 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 1.89178e-30
Internal
sp_v2.0_unigene46510 SustainPine v2.0 442
AutoFact: Polygalacturonase n=2 Tax=Cucumis RepID=E5GBI5_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene46722 SustainPine v2.0 510
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-35
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene47946 SustainPine v2.0 661
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin-like metallo-phosphoesterase-like protein 0.0
N-terminus
sp_v2.0_unigene48040 SustainPine v2.0 421
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.2039e-45
Internal
sp_v2.0_unigene48083 SustainPine v2.0 456
AutoFact: Pentatricopeptide repeat domain containing protein, putative [Solanum demissum] 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.94466e-42
Internal
sp_v2.0_unigene48149 SustainPine v2.0 674
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SL84_RICCO 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
Putative Complete
sp_v2.0_unigene48361 SustainPine v2.0 427
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 1.0e-23
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.28864e-23
Internal
sp_v2.0_unigene48667 SustainPine v2.0 427
AutoFact: putative pectate-lyase [Capsicum annuum] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 1.44628e-40
N-terminus
sp_v2.0_unigene48899 SustainPine v2.0 366
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SL84_RICCO 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 6.70511e-34
Internal
sp_v2.0_unigene50294 SustainPine v2.0 602
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SLE0_RICCO 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 3.71344e-43
N-terminus
sp_v2.0_unigene50622 SustainPine v2.0 355
AutoFact: Putative leucine rich repeat transmembrane protein kinase n=1 Tax=Corchorus olitorius RepID=B6E503_9ROSI 2.0e-12
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase haiku2-like 2.91128e-14
Internal
sp_v2.0_unigene51323 SustainPine v2.0 353
AutoFact: pfam00544, Pec_lyase_C, Pectate lyase 7.0e-08
FL-Next: sp=Major pollen allergen Jun a 1; Juniperus ashei (Ozark white cedar). 0.0
Blast2go: pectate lyase 3.13145e-11
C-terminus
sp_v2.0_unigene51462 SustainPine v2.0 241
AutoFact: pfam00069, Pkinase, Protein kinase domain 1.0e-09
FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At3g47570; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at3g47570-like 9.12663e-20
Internal
sp_v2.0_unigene53806 SustainPine v2.0 521
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-17
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polygalacturonase qrt3-like 1.56974e-21
Internal
sp_v2.0_unigene54112 SustainPine v2.0 479
AutoFact: Os01g0618900 protein n=2 Tax=Oryza sativa RepID=Q5ZBG4_ORYSJ 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 5.99539e-13
Internal
sp_v2.0_unigene54609 SustainPine v2.0 301
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RBA6_RICCO 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.33916e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain