Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9704 SustainPine v2.0 342
AutoFact: Polygalacturonase (Fragment) n=1 Tax=Eucalyptus globulus subsp. globulus RepID=Q153G0_EUCGG 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.23748e-20
Internal
sp_v2.0_unigene9896 SustainPine v2.0 1627
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
C-terminus
sp_v2.0_unigene9969 SustainPine v2.0 1732
AutoFact: Pectinesterase n=2 Tax=Selaginella moellendorffii RepID=D8RSX7_SELML 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectinesterase family protein 0.0
Complete
sp_v2.0_unigene10104 SustainPine v2.0 641
AutoFact: polygalacturonase [Solanum lycopersicum] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Putative C-terminus
sp_v2.0_unigene10121 SustainPine v2.0 532
AutoFact: pectate lyase [Musa acuminata AAA Group] 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 6.30206e-36
C-terminus
sp_v2.0_unigene10279 SustainPine v2.0 1773
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 0.0
Complete
sp_v2.0_unigene11065 SustainPine v2.0 859
AutoFact: pectate lyase [Arabidopsis thaliana] sp|Q9FM66.1|PEL21_ARATH RecName: Full=Putative pectate lyase 21; Flags: Precursor dbj|BAB09239.1| pectate lyase [Arabidopsis thaliana] gb|AED96672.1| pectate lyase [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
C-terminus
sp_v2.0_unigene11311 SustainPine v2.0 909
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 4.0e-24
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 3.2253e-27
C-terminus
sp_v2.0_unigene11632 SustainPine v2.0 1042
AutoFact: ribosome-associated GTPase [Cyanothece sp. CCY0110] gb|EAZ93119.1| ribosome-associated GTPase [Cyanothece sp. CCY0110] 9.0e-35
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: gtp binding 0.0
C-terminus
sp_v2.0_unigene12177 SustainPine v2.0 434
AutoFact: polygalacturonase [Citrus sinensis] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Internal
sp_v2.0_unigene13091 SustainPine v2.0 741
AutoFact: Pectinesterase n=1 Tax=Populus trichocarpa RepID=B9IHB0_POPTR 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 8-like 0.0
Putative C-terminus
sp_v2.0_unigene13164 SustainPine v2.0 2199
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
Complete
sp_v2.0_unigene13860 SustainPine v2.0 937
AutoFact: pectinesterase 11 [Arabidopsis thaliana] sp|Q9SIJ9.1|PME11_ARATH RecName: Full=Putative pectinesterase 11; Short=PE 11; AltName: Full=Pectin methylesterase 11; Short=AtPME11 gb|AAD23644.1| putative pectinesterase [Arabidopsis thaliana] gb|AEC07202.1| pect 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectinesterase 11 0.0
Putative N-terminus
sp_v2.0_unigene14518 SustainPine v2.0 520
AutoFact: PPR domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.73783e-41
Internal
sp_v2.0_unigene14535 SustainPine v2.0 636
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RFE2_RICCO 9.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin-like metallo-phosphoesterase-like protein 4.85354e-36
Putative C-terminus
sp_v2.0_unigene14712 SustainPine v2.0 1998
AutoFact: Pectate lyase [Prunus mume] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
C-terminus
sp_v2.0_unigene14856 SustainPine v2.0 2010
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
Complete
sp_v2.0_unigene15279 SustainPine v2.0 716
AutoFact: polygalacturonase [Persea americana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Putative C-terminus
sp_v2.0_unigene15730 SustainPine v2.0 1792
AutoFact: pectate lyase [Arabidopsis thaliana] gb|ACE95182.1| At3g55140 [Arabidopsis thaliana] gb|ACF04806.1| At3g55140 [Arabidopsis thaliana] gb|AEE79344.1| pectate lyase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectate lyase 4-like 0.0
Complete
sp_v2.0_unigene15975 SustainPine v2.0 1925
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain