Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene74757 SustainPine v2.0 336
AutoFact: Pectinesterase (Fragment) n=1 Tax=Vitis hybrid cultivar RepID=A9CSJ7_9ROSI 3.0e-38
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Blast2go: pectin methylesterase 6.2069e-38
Internal
sp_v2.0_unigene74948 SustainPine v2.0 205
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 2.81844e-34
Internal
sp_v2.0_unigene76713 SustainPine v2.0 366
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 8.31008e-23
Putative N-terminus
sp_v2.0_unigene76821 SustainPine v2.0 825
AutoFact: polygalacturonase precursor [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
sp_v2.0_unigene77077 SustainPine v2.0 758
AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene77164 SustainPine v2.0 752
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RDW4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
C-terminus
sp_v2.0_unigene77181 SustainPine v2.0 887
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
C-terminus
sp_v2.0_unigene77253 SustainPine v2.0 368
AutoFact: putative polygalacturonase precursor [Oryza sativa Japonica Group] 4.0e-22
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Blast2go: polygalacturonase 8.17822e-27
Internal
sp_v2.0_unigene78867 SustainPine v2.0 249
AutoFact: putative pectin methylesterase [Picea abies] 4.0e-09
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 7.89103e-11
N-terminus
sp_v2.0_unigene79134 SustainPine v2.0 635
AutoFact: pectate lyase precursor [Glycine max] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
C-terminus
sp_v2.0_unigene79267 SustainPine v2.0 455
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tvp38 tmem64 family membrane protein slr0305-like 9.67822e-30
Internal
sp_v2.0_unigene79577 SustainPine v2.0 698
AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene80674 SustainPine v2.0 409
AutoFact: Polygalacturonase n=2 Tax=Arabidopsis thaliana RepID=F4I672_ARATH 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 5.0814e-29
Internal
sp_v2.0_unigene81612 SustainPine v2.0 160
AutoFact: Putative pectate lyase 2 n=3 Tax=Arabidopsis RepID=PLY2_ARATH 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 3.9109e-17
Internal
sp_v2.0_unigene81884 SustainPine v2.0 343
AutoFact: Probable pectate lyase 10 n=2 Tax=Arabidopsis RepID=PLY10_ARATH 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 4.97181e-42
Internal
sp_v2.0_unigene82737 SustainPine v2.0 959
AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.57331e-43
Putative C-terminus
sp_v2.0_unigene83667 SustainPine v2.0 460
AutoFact: putative pectate lyase [Oryza sativa Japonica Group] 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 1.60978e-12
Putative C-terminus
sp_v2.0_unigene83695 SustainPine v2.0 645
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia subclass 0.0
Internal
sp_v2.0_unigene84600 SustainPine v2.0 649
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 0.0
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polygalacturonase qrt3 0.0
Internal
sp_v2.0_unigene84802 SustainPine v2.0 541
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana] gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gb|AEE80311.1| glycoside hydrolase 2.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 4.20129e-07
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain