Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene63478 SustainPine v2.0 384
• AutoFact: Pectate lyase n=7 Tax=Rosodae RepID=E3VSV6_9ROSA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 4.62598e-23
Internal
sp_v2.0_unigene63861 SustainPine v2.0 423
• AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 8.0e-30
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectinesterase 53-like 1.254e-31
C-terminus
sp_v2.0_unigene65629 SustainPine v2.0 382
• AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal
sp_v2.0_unigene65737 SustainPine v2.0 687
• AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 3.45356e-26
C-terminus
sp_v2.0_unigene65748 SustainPine v2.0 694
• AutoFact: Shaggy-like kinase [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: shaggy-related protein kinase eta 0.0
C-terminus
sp_v2.0_unigene65804 SustainPine v2.0 676
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal
sp_v2.0_unigene66186 SustainPine v2.0 390
• AutoFact: pectate lyase [Salix gilgiana] 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 2.08297e-35
Internal
sp_v2.0_unigene66367 SustainPine v2.0 470
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Blast2go: pectin methylesterase 0.0
Internal
sp_v2.0_unigene66498 SustainPine v2.0 515
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 6.0e-28
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.20735e-38
C-terminus
sp_v2.0_unigene67202 SustainPine v2.0 496
• AutoFact: Pectinesterase n=2 Tax=Vitis vinifera RepID=A5B5Z3_VITVI 1.0e-34
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectinesterase 53-like 8.0953e-42
C-terminus
sp_v2.0_unigene67409 SustainPine v2.0 162
• AutoFact: pectate lyase-like protein [Arabidopsis thaliana] 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 1.97393e-12
Internal
sp_v2.0_unigene67556 SustainPine v2.0 355
• AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAM14020.1| unknown protein [Arabidopsis thaliana] gb|AAM91751.1| unknown protein [Arabidopsis thaliana] gb|AED95784.1| glycoside hydrolase fami 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable polygalacturonase-like 3.3773e-16
N-terminus
sp_v2.0_unigene67563 SustainPine v2.0 554
• AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal
sp_v2.0_unigene68667 SustainPine v2.0 630
• AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
N-terminus
sp_v2.0_unigene68707 SustainPine v2.0 548
• AutoFact: pectate lyase [Musa acuminata AAA Group] 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 4.05085e-17
C-terminus
sp_v2.0_unigene69212 SustainPine v2.0 322
• AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable polygalacturonase-like 0.0
Internal
sp_v2.0_unigene69398 SustainPine v2.0 311
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s11 9.98429e-34
Putative N-terminus
sp_v2.0_unigene70464 SustainPine v2.0 242
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 3.0e-32
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectin methylesterase 5.8314e-32
Internal
sp_v2.0_unigene73127 SustainPine v2.0 234
• AutoFact: Unassigned protein
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 2.73303e-19
Putative N-terminus
sp_v2.0_unigene74431 SustainPine v2.0 380
• AutoFact: Protein kinase [Medicago truncatula] 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase-like resistance protein 1.12625e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain