Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene22408 SustainPine v2.0 824
• AutoFact: DUF716 domain containing protein 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.09329e-40
Putative C-terminus
sp_v2.0_unigene22595 SustainPine v2.0 2166
• AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
Complete
sp_v2.0_unigene23009 SustainPine v2.0 1117
• AutoFact: DUF716 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene23131 SustainPine v2.0 893
• AutoFact: Receptor-like protein kinase THESEUS 1 n=3 Tax=rosids RepID=THE1_ARATH 0.0
• FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: kinase-like protein 0.0
Internal
sp_v2.0_unigene23263 SustainPine v2.0 1726
• AutoFact: C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis thaliana] gb|ABD85151.1| At1g68070 [Arabidopsis thaliana] gb|AEE34743.1| C3HC4-type RING finger d 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase at1g12760-like 0.0
Complete
sp_v2.0_unigene23681 SustainPine v2.0 886
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
Putative C-terminus
sp_v2.0_unigene23770 SustainPine v2.0 1508
• AutoFact: DUF716 domain containing protein 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene23872 SustainPine v2.0 1410
• AutoFact: DUF716 domain containing protein 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene24622 SustainPine v2.0 234
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 7.71394e-12
N-terminus
sp_v2.0_unigene24985 SustainPine v2.0 1383
• AutoFact: ABI3-interacting protein 3 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF5_9CONI 8.0e-40
• FL-Next: tr=ABI3-interacting protein 3; Callitropsis nootkatensis. 0.0
• Blast2go: abi3-interacting protein 3 6.44597e-44
C-terminus
sp_v2.0_unigene25052 SustainPine v2.0 2616
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T0P2_RICCO 0.0
• FL-Next: sp=RING-H2 finger protein ATL40; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ring finger and transmembrane domain-containing protein 2-like 0.0
Putative Complete
sp_v2.0_unigene25122 SustainPine v2.0 1546
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase 0.0
C-terminus
sp_v2.0_unigene25397 SustainPine v2.0 724
• AutoFact: pfam03145, Sina, Seven in absentia protein family 7.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin ligase 0.0
Putative N-terminus
sp_v2.0_unigene25426 SustainPine v2.0 851
• AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
C-terminus
sp_v2.0_unigene25635 SustainPine v2.0 1569
• AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein suppressor of gene silencing 3-like 0.0
C-terminus
sp_v2.0_unigene25813 SustainPine v2.0 1363
• AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein suppressor of gene silencing 3-like 0.0
C-terminus
sp_v2.0_unigene25847 SustainPine v2.0 945
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 7.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.58286e-35
N-terminus
sp_v2.0_unigene25911 SustainPine v2.0 877
• AutoFact: chromatin complex subunit A101 [Zea mays] gb|AAL73042.1|AF461813_1 chromatin complex subunit A101 [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
sp_v2.0_unigene26123 SustainPine v2.0 1947
• AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase prt1 0.0
Complete
sp_v2.0_unigene26438 SustainPine v2.0 846
• AutoFact: E3 ubiquitin-protein ligase makorin [Arabidopsis thaliana] ref|NP_974255.1| E3 ubiquitin-protein ligase makorin [Arabidopsis thaliana] sp|Q6IDS6.1|C3H35_ARATH RecName: Full=E3 ubiquitin-protein ligase makorin; AltName: Full=Zinc finger CCCH domain-contain 4.0e-23
• FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: e3 ubiquitin-protein ligase makorin 9.26154e-36
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain