Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene13549 SustainPine v2.0 381
AutoFact: pfam07714, Pkinase_Tyr, Protein tyrosine kinase 4.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 7.14662e-43
Internal
sp_v2.0_unigene13552 SustainPine v2.0 871
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 9.99995e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
sp_v2.0_unigene13745 SustainPine v2.0 499
AutoFact: RING-H2 finger protein ATL72 [Arabidopsis thaliana] sp|Q9SG96.1|ATL72_ARATH RecName: Full=RING-H2 finger protein ATL72 gb|AAF19558.1|AC011708_1 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAO44037.1| At3g10910 [Arabidopsis thaliana] dbj|BA 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.26785e-12
C-terminus
sp_v2.0_unigene13763 SustainPine v2.0 931
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.41713e-19
N-terminus
sp_v2.0_unigene13819 SustainPine v2.0 812
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 0.0
Internal
sp_v2.0_unigene14502 SustainPine v2.0 1457
AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] dbj|BAE98370.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30249.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c3hc4-type ring finger protein 0.0
Complete
sp_v2.0_unigene14513 SustainPine v2.0 841
AutoFact: RING-H2 finger protein ATL68 [Arabidopsis thaliana] sp|Q9M313.1|ATL68_ARATH RecName: Full=RING-H2 finger protein ATL68 gb|AAL16112.1|AF428280_1 AT3g61550/F2A19_150 [Arabidopsis thaliana] emb|CAB71085.1| putative protein [Arabidopsis thaliana] gb|AAM51602. 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.25119e-42
Putative C-terminus
sp_v2.0_unigene14621 SustainPine v2.0 1018
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene14714 SustainPine v2.0 745
AutoFact: Copine III-like protein (Fragment) n=1 Tax=Picea abies RepID=B2KZF7_PICAB 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
C-terminus
sp_v2.0_unigene14798 SustainPine v2.0 737
AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] gb|AEE29740.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger (c3hc4-type ring finger) family protein 0.0
Putative C-terminus
sp_v2.0_unigene14832 SustainPine v2.0 806
AutoFact: Putative zinc finger protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6L4V6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l11 methyltransferase 0.0
C-terminus
sp_v2.0_unigene14865 SustainPine v2.0 940
AutoFact: F27J15.13 n=2 Tax=Arabidopsis thaliana RepID=Q9M9B0_ARATH 5.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g67720-like 1.03413e-35
Putative C-terminus
sp_v2.0_unigene15085 SustainPine v2.0 1657
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase-like protein 0.0
C-terminus
sp_v2.0_unigene15922 SustainPine v2.0 1209
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Complete
sp_v2.0_unigene16082 SustainPine v2.0 1203
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851156.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974908.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAN13007.1| unknown protein [Arabidops 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene16160 SustainPine v2.0 1793
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
Complete
sp_v2.0_unigene16498 SustainPine v2.0 1390
AutoFact: nitric oxide synthase-interacting protein [Arabidopsis thaliana] gb|AAD25548.1|AC005850_5 Unknown protein [Arabidopsis thaliana] gb|AAM62779.1| unknown [Arabidopsis thaliana] gb|AAY57588.1| RING finger family protein [Arabidopsis thaliana] gb|ABG48469.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitric oxide synthase-interacting protein 0.0
Complete
sp_v2.0_unigene17695 SustainPine v2.0 2149
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Putative Complete
sp_v2.0_unigene18037 SustainPine v2.0 934
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
Complete
sp_v2.0_unigene18173 SustainPine v2.0 2385
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain