Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene85091 SustainPine v2.0 331
AutoFact: Zinc finger family protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI5_PICAB 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.89023e-15
Internal
sp_v2.0_unigene85107 SustainPine v2.0 710
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene85139 SustainPine v2.0 583
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: receptor-like protein kinase theseus 1-like 3.93283e-34
Complete
sp_v2.0_unigene85287 SustainPine v2.0 632
AutoFact: pfam03145, Sina, Seven in absentia protein family 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
N-terminus
sp_v2.0_unigene85853 SustainPine v2.0 1004
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene85898 SustainPine v2.0 722
AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AAK44172.1|AF370357_1 unknown protein [Arabidopsis thaliana] gb|AAL15193.1| unknown protein [Arabidopsis thaliana] gb|AAM61248.1| unknown [Arabidopsis thaliana] gb|AEE35285.1| C3HC4-type RING finger 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c3hc4-type ring finger protein 0.0
N-terminus
sp_v2.0_unigene85976 SustainPine v2.0 416
AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.24208e-44
C-terminus
sp_v2.0_unigene89497 SustainPine v2.0 284
AutoFact: SINA [Phyllostachys praecox] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 1.38583e-38
Internal
sp_v2.0_unigene90922 SustainPine v2.0 298
AutoFact: Unassigned protein
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v2.0_unigene91304 SustainPine v2.0 566
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Internal
sp_v2.0_unigene92262 SustainPine v2.0 530
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.37591e-43
N-terminus
sp_v2.0_unigene92356 SustainPine v2.0 363
AutoFact: RING-H2 finger protein ATL2 n=2 Tax=Arabidopsis RepID=ATL2_ARATH 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain