Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene40169 SustainPine v2.0 435
AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 3.05369e-34
C-terminus
sp_v2.0_unigene40445 SustainPine v2.0 217
AutoFact: Snf2 histone linker phd ring helicase, putative n=1 Tax=Ricinus communis RepID=B9S4G9_RICCO 2.0e-17
FL-Next: tr=Snf2 histone linker phd ring helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: e3 ubiquitin-protein ligase shprh-like 5.58193e-21
Internal
sp_v2.0_unigene40637 SustainPine v2.0 597
AutoFact: abscisic acid receptor PYL7 [Arabidopsis thaliana] sp|Q1ECF1.1|PYL7_ARATH RecName: Full=Abscisic acid receptor PYL7; AltName: Full=ABI1-binding protein 7; AltName: Full=PYR1-like protein 7; AltName: Full=Regulatory components of ABA receptor 2 gb|ABF83673 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl8 0.0
N-terminus
sp_v2.0_unigene41068 SustainPine v2.0 346
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_123.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7UBN9_VITVI 1.0e-28
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 1.06415e-31
Internal
sp_v2.0_unigene41304 SustainPine v2.0 532
AutoFact: SW2/SNF2 family-like protein n=1 Tax=Populus trichocarpa RepID=B9N1U6_POPTR 9.0e-35
FL-Next: tr=SW2/SNF2 family-like protein; subsp. trichocarpa). 0.0
Blast2go: e3 ubiquitin-protein ligase shprh-like 1.19853e-41
N-terminus
sp_v2.0_unigene41867 SustainPine v2.0 287
AutoFact: Cellulose synthase A catalytic subunit 3 [UDP-forming] n=4 Tax=Brassicaceae RepID=CESA3_ARATH 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase catalytic subunit 9.2884e-39
Internal
sp_v2.0_unigene42318 SustainPine v2.0 415
AutoFact: RING-H2 finger protein ATL2 n=2 Tax=Arabidopsis RepID=ATL2_ARATH 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v2.0_unigene42370 SustainPine v2.0 335
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.23551e-12
Internal
sp_v2.0_unigene42474 SustainPine v2.0 647
AutoFact: Preprotein translocase secA-like protein n=5 Tax=Arabidopsis thaliana RepID=F4HY36_ARATH 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.82169e-44
C-terminus
sp_v2.0_unigene42722 SustainPine v2.0 330
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.36883e-33
Internal
sp_v2.0_unigene42822 SustainPine v2.0 478
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene42833 SustainPine v2.0 427
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Putative N-terminus
sp_v2.0_unigene43160 SustainPine v2.0 324
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 4.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 1.2072e-32
Internal
sp_v2.0_unigene43375 SustainPine v2.0 524
AutoFact: RING-H2 finger protein ATL43 [Arabidopsis thaliana] gb|AAW81728.1| At5g05810 [Arabidopsis thaliana] gb|AAX49381.1| At5g05810 [Arabidopsis thaliana] gb|AED90928.1| RING-H2 finger protein ATL43 [Arabidopsis thaliana] 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger protein 0.0
Internal
sp_v2.0_unigene43387 SustainPine v2.0 403
AutoFact: Cellulose synthase catalytic subunit n=3 Tax=Pinaceae RepID=Q5DI95_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase 0.0
N-terminus
sp_v2.0_unigene43921 SustainPine v2.0 353
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene44079 SustainPine v2.0 473
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_191.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRM5_VITVI 3.00004e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at4g01020-like protein 0.0
Internal
sp_v2.0_unigene45002 SustainPine v2.0 224
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB09338.1| serine/threonine-specific protein kinase-like protein [Arabidopsis thaliana] gb|AED96515.1| protein kinase family protein [Arabidopsis thaliana] 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase family protein 1.11044e-25
Internal
sp_v2.0_unigene45189 SustainPine v2.0 523
AutoFact: pfam00628, PHD, PHD-finger 2.0e-06
FL-Next: sp=Histone acetyltransferase HAC4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein at4g10930-like 0.0
Internal
sp_v2.0_unigene45880 SustainPine v2.0 317
AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna 1.32927e-41
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain