Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene32078 SustainPine v2.0 1602
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase a catalytic subunit 3 0.0
C-terminus
sp_v2.0_unigene32206 SustainPine v2.0 676
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: leucine-rich repeat protein kinase-like protein 0.0
C-terminus
sp_v2.0_unigene32247 SustainPine v2.0 610
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at1g74600-like protein 0.0
Internal
sp_v2.0_unigene32416 SustainPine v2.0 646
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 7.0e-34
• FL-Next: sp=RING-H2 finger protein ATL72; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ring-h2 finger protein 0.0
Complete
sp_v2.0_unigene32666 SustainPine v2.0 898
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 0.0
Putative Complete
sp_v2.0_unigene33308 SustainPine v2.0 1315
• AutoFact: Zinc finger, C3HC4 type (RING finger) containing protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene33365 SustainPine v2.0 1110
• AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cellulose synthase-like protein e1 0.0
Internal
sp_v2.0_unigene33490 SustainPine v2.0 868
• AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q94K98.2|Y1720_ARATH RecName: Full=UPF0392 protein At1g27200 gb|AAF79871.1|AC000348_24 T7N9.26 [Arabidopsis thaliana] gb|AAN12989.1| unknown protein [Arabidopsis thaliana] gb|AEE30793.1| uncharacterized pr 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene33834 SustainPine v2.0 479
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
N-terminus
sp_v2.0_unigene33843 SustainPine v2.0 1493
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene34256 SustainPine v2.0 375
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 2.97961e-34
Putative C-terminus
sp_v2.0_unigene34270 SustainPine v2.0 349
• AutoFact: putative E3 ubiquitin-protein ligase ORTHRUS 4 [Arabidopsis thaliana] sp|Q9C8E1.1|ORTH4_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase ORTHRUS 4; AltName: Full=Protein VARIANT IN METHYLATION 4 gb|AAG51294.1|AC026480_1 RING zinc finger protein, p 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase orthrus 2 4.91501e-21
N-terminus
sp_v2.0_unigene34598 SustainPine v2.0 479
• AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAL38845.1| putative SecA-type chloroplast protein transport factor [Arabidopsis thaliana] gb|AAM20152.1| putative SecA-type chloroplast transport factor protein [Arabidopsis thaliana] dbj|BAF01579.1| hyp 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: preprotein translocase seca family protein 0.0
N-terminus
sp_v2.0_unigene35088 SustainPine v2.0 540
• AutoFact: Unassigned protein
unknown
sp_v2.0_unigene35243 SustainPine v2.0 525
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42417.1| unknown protein [Arabidopsis thaliana] gb|AAP68217.1| At3g05250 [Arabidopsis thaliana] gb|AAZ14063.1| At3g05250 [Arabidopsis thaliana] gb|AEE74211.1| RING/U-box domain-containing 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein binding 3.7602e-37
N-terminus
sp_v2.0_unigene35798 SustainPine v2.0 614
• AutoFact: PHD multi-domain protein 3.0e-09
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 4.1058e-43
Internal
sp_v2.0_unigene35850 SustainPine v2.0 588
• AutoFact: COP1 homolog [Solanum lycopersicum] 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.4013e-45
Putative C-terminus
sp_v2.0_unigene36059 SustainPine v2.0 471
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Internal
sp_v2.0_unigene36605 SustainPine v2.0 789
• AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: at5g13530-like protein 0.0
Internal
sp_v2.0_unigene36813 SustainPine v2.0 563
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
• FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain