Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene61957 SustainPine v2.0 549
AutoFact: RING-H2 finger protein ATL68 [Arabidopsis thaliana] sp|Q9M313.1|ATL68_ARATH RecName: Full=RING-H2 finger protein ATL68 gb|AAL16112.1|AF428280_1 AT3g61550/F2A19_150 [Arabidopsis thaliana] emb|CAB71085.1| putative protein [Arabidopsis thaliana] gb|AAM51602. 1.0e-06
FL-Next: sp=RING-H2 finger protein ATL68; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger family protein 6.69546e-09
Putative N-terminus
sp_v2.0_unigene61998 SustainPine v2.0 525
AutoFact: Sporulation protein RMD5, putative n=1 Tax=Ricinus communis RepID=B9RX39_RICCO 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene62107 SustainPine v2.0 600
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU82_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene62454 SustainPine v2.0 1098
AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Putative Complete
sp_v2.0_unigene62536 SustainPine v2.0 645
AutoFact: Beta-glucosidase n=1 Tax=Pinus contorta RepID=Q9ZT64_PINCO 8.0e-20
FL-Next: tr=Beta-glucosidase; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: protein 1.73857e-23
Internal
sp_v2.0_unigene62556 SustainPine v2.0 419
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1 6.5861e-44
Internal
sp_v2.0_unigene62560 SustainPine v2.0 726
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
N-terminus
sp_v2.0_unigene62571 SustainPine v2.0 517
AutoFact: rgd1, SGS3, lbl1; ragged seedling1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Internal
sp_v2.0_unigene62614 SustainPine v2.0 893
AutoFact: protease-associated and C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] gb|AAL38826.1| unknown protein [Arabidopsis thaliana] gb|AAM91777.1| unknown protein [Arabidopsis thaliana] gb|AEE35260.1| protease-associated and C3HC4-type R 7.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rnf167-like 0.0
N-terminus
sp_v2.0_unigene62622 SustainPine v2.0 305
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4H8_RICCO 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100501634 3.94633e-16
C-terminus
sp_v2.0_unigene62640 SustainPine v2.0 531
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T1L9_VITVI 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
N-terminus
sp_v2.0_unigene62696 SustainPine v2.0 465
AutoFact: zf-rbx1 domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: loc100127334 protein 0.0
C-terminus
sp_v2.0_unigene62720 SustainPine v2.0 651
AutoFact: putative peroxin [Oryza sativa Japonica Group] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.38869e-17
Internal
sp_v2.0_unigene62766 SustainPine v2.0 358
AutoFact: FANCL_C multi-domain protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase listerin-like 0.0
Internal
sp_v2.0_unigene62838 SustainPine v2.0 291
AutoFact: ankyrin-repeat containing protein [Arabidopsis thaliana] 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 0.0
C-terminus
sp_v2.0_unigene63344 SustainPine v2.0 461
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SLE0_RICCO 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor kinase-like protein 1.75975e-22
Internal
sp_v2.0_unigene63349 SustainPine v2.0 220
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 5.49629e-19
N-terminus
sp_v2.0_unigene63363 SustainPine v2.0 525
AutoFact: DUF1644 domain containing protein 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100823577 isoform 1 2.88854e-25
N-terminus
sp_v2.0_unigene63550 SustainPine v2.0 690
AutoFact: zf-rbx1 multi-domain protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
C-terminus
sp_v2.0_unigene63658 SustainPine v2.0 943
AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain