Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene52755 SustainPine v2.0 388
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 4.76359e-33
Internal
sp_v2.0_unigene52765 SustainPine v2.0 345
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.72474e-32
Internal
sp_v2.0_unigene52796 SustainPine v2.0 458
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene53222 SustainPine v2.0 412
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 7.20012e-12
N-terminus
sp_v2.0_unigene53357 SustainPine v2.0 431
• AutoFact: leucine rich repeat protein [Cicer arietinum] 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: leucine rich repeat protein 0.0
Internal
sp_v2.0_unigene53447 SustainPine v2.0 315
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 8.10876e-28
C-terminus
sp_v2.0_unigene53515 SustainPine v2.0 350
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T428_RICCO 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene53995 SustainPine v2.0 213
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-21
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein chloroplastic-like 1.73946e-25
Internal
sp_v2.0_unigene54022 SustainPine v2.0 488
• AutoFact: Putative RING zinc finger protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S5X9_ORYSJ 1.0e-14
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein ariadne- 2.44575e-16
N-terminus
sp_v2.0_unigene54177 SustainPine v2.0 497
• AutoFact: RING-H2 finger protein ATL60 n=2 Tax=Arabidopsis RepID=ATL60_ARATH 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 1.39929e-33
N-terminus
sp_v2.0_unigene54282 SustainPine v2.0 365
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: vacuolar protein sorting-associated protein 11 homolog 3.50325e-44
N-terminus
sp_v2.0_unigene54381 SustainPine v2.0 481
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T0S6_PHYPA 3.0e-25
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: retinoblastoma-binding protein 2.15729e-30
N-terminus
sp_v2.0_unigene54811 SustainPine v2.0 483
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26782, mitochondrial; Flags: Precursor dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thal 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene54841 SustainPine v2.0 368
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide repeat-like family protein 0.0
Internal
sp_v2.0_unigene54946 SustainPine v2.0 446
• AutoFact: E3 ubiquitin-protein ligase listerin n=5 Tax=Camelineae RepID=LTN1_ARATH 5.0e-32
• FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ring zinc finger-containing protein 2.99065e-41
Internal
sp_v2.0_unigene55053 SustainPine v2.0 357
• AutoFact: PREDICTED: e3 ubiquitin-protein ligase TRIM37-like isoform 3 [Macaca mulatta] ref|XP_001107393.2| PREDICTED: e3 ubiquitin-protein ligase TRIM37-like isoform 6 [Macaca mulatta] 1.0e-24
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: tripartite motif-containing 37 0.0
Internal
sp_v2.0_unigene55155 SustainPine v2.0 267
• AutoFact: Protein translocase subunit secA (Fragment) n=1 Tax=Jatropha curcas RepID=E6NU73_9ROSI 4.0e-32
• FL-Next: sp=Protein translocase subunit SecA; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
• Blast2go: preprotein translocase seca-like protein 2.17625e-38
Internal
sp_v2.0_unigene55224 SustainPine v2.0 269
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 1.0e-18
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: snf2 histone linker phd ring 4.89645e-22
Internal
sp_v2.0_unigene55277 SustainPine v2.0 416
• AutoFact: Unassigned protein
unknown
sp_v2.0_unigene55420 SustainPine v2.0 238
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.56653e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain