Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene44522 SustainPine v2.0 321
AutoFact: transcription factor-like protein [Arabidopsis thaliana] gb|AED90905.1| transcription factor-like protein [Arabidopsis thaliana] 6.0e-17
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nf-x1-type zinc finger protein nfxl1 9.55256e-27
Internal
sp_v2.0_unigene44770 SustainPine v2.0 491
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene44860 SustainPine v2.0 494
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v2.0_unigene44934 SustainPine v2.0 726
AutoFact: RING-H2 finger protein ATL66 [Arabidopsis thaliana] sp|Q9SRM0.1|ATL66_ARATH RecName: Full=RING-H2 finger protein ATL66 gb|AAF01530.1|AC009991_26 hypothetical protein [Arabidopsis thaliana] gb|AAG50960.1|AC073395_2 RING zinc finger protein; 17145-17621 [Ar 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase atl23-like 0.0
C-terminus
sp_v2.0_unigene45002 SustainPine v2.0 224
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB09338.1| serine/threonine-specific protein kinase-like protein [Arabidopsis thaliana] gb|AED96515.1| protein kinase family protein [Arabidopsis thaliana] 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase family protein 1.11044e-25
Internal
sp_v2.0_unigene45048 SustainPine v2.0 619
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: cohesin loading factor subunit scc2 0.0
Internal
sp_v2.0_unigene45189 SustainPine v2.0 523
AutoFact: pfam00628, PHD, PHD-finger 2.0e-06
FL-Next: sp=Histone acetyltransferase HAC4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein at4g10930-like 0.0
Internal
sp_v2.0_unigene45513 SustainPine v2.0 492
AutoFact: Probable histone acetyltransferase HAC-like 1 n=4 Tax=Poaceae RepID=HACL1_ORYSJ 0.0
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
sp_v2.0_unigene45880 SustainPine v2.0 317
AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna 1.32927e-41
Internal
sp_v2.0_unigene46111 SustainPine v2.0 505
AutoFact: concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] sp|O81291.1|LRK44_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.4; Short=LecRK-IV.4; Flags: Precursor gb|AAC19274.1| T14P8.4 [Arabidopsis thaliana] emb|CAB80735 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: concanavalin a-like lectin kinase-like protein 0.0
Internal
sp_v2.0_unigene46235 SustainPine v2.0 589
AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 0.0
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene46553 SustainPine v2.0 396
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H252_POPTR 5.0e-30
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 6.26027e-35
Internal
sp_v2.0_unigene46819 SustainPine v2.0 299
AutoFact: CHD3-type chromatin-remodeling factor PICKLE n=2 Tax=Arabidopsis RepID=PKL_ARATH 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene47505 SustainPine v2.0 549
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 3.51795e-29
C-terminus
sp_v2.0_unigene48341 SustainPine v2.0 895
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
Putative C-terminus
sp_v2.0_unigene48395 SustainPine v2.0 827
AutoFact: WS00744.C21_P09 WS-PS-N-A-8 Picea glauca cDNA clone WS00744_P09 3, mRNA sequence. 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring u-box domain-containing protein 5.16731e-29
Putative N-terminus
sp_v2.0_unigene48689 SustainPine v2.0 441
AutoFact: Vacuolar protein sorting vps41, putative n=1 Tax=Ricinus communis RepID=B9SCM9_RICCO 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
Internal
sp_v2.0_unigene48702 SustainPine v2.0 838
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Internal
sp_v2.0_unigene48748 SustainPine v2.0 467
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.10665e-25
N-terminus
sp_v2.0_unigene48759 SustainPine v2.0 411
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain