Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene12586 SustainPine v2.0 1971
AutoFact: RING Zn-finger domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IK69_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene12622 SustainPine v2.0 471
AutoFact: Os07g0575600 protein n=2 Tax=Oryza sativa RepID=Q8LIP2_ORYSJ 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene12656 SustainPine v2.0 625
AutoFact: Regulator of telomere elongation helicase 1 n=2 Tax=Andropogoneae RepID=B6UDG6_MAIZE 0.0
FL-Next: tr=Regulator of telomere elongation helicase 1; Zea mays (Maize). 0.0
Blast2go: regulator of telomere elongation helicase 1 0.0
Internal
sp_v2.0_unigene12742 SustainPine v2.0 1879
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_973461.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11603.1|AF424609_1 unknown protein [Arabidopsis thaliana] gb|AAM15000.1| Expressed protein [Arabidopsis thaliana 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene12834 SustainPine v2.0 663
AutoFact: contains region of similarity to beta transducin family [Arabidopsis thaliana] emb|CAB80889.1| AT4g00800 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
sp_v2.0_unigene13147 SustainPine v2.0 798
AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 0.0
Complete
sp_v2.0_unigene13197 SustainPine v2.0 833
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene13292 SustainPine v2.0 790
AutoFact: F21M11.4 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZWC2_ARATH 3.0e-26
FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein breast cancer susceptibility 1 homolog 8.6907e-32
Internal
sp_v2.0_unigene13497 SustainPine v2.0 159
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atvps11 protein 1.6754e-21
Internal
sp_v2.0_unigene13510 SustainPine v2.0 622
AutoFact: NF-X1-type zinc finger protein NFXL1 [Arabidopsis thaliana] sp|Q9SY59.1|NFXL1_ARATH RecName: Full=NF-X1-type zinc finger protein NFXL1; Short=AtNFXL1 gb|AAD32867.1|AC005489_5 F14N23.5 [Arabidopsis thaliana] gb|AEE28549.1| NF-X1-type zinc finger protein NF 3.0e-39
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nf-x1-type zinc finger protein nfxl1-like 0.0
Internal
sp_v2.0_unigene13549 SustainPine v2.0 381
AutoFact: pfam07714, Pkinase_Tyr, Protein tyrosine kinase 4.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 7.14662e-43
Internal
sp_v2.0_unigene13552 SustainPine v2.0 871
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 9.99995e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
sp_v2.0_unigene13745 SustainPine v2.0 499
AutoFact: RING-H2 finger protein ATL72 [Arabidopsis thaliana] sp|Q9SG96.1|ATL72_ARATH RecName: Full=RING-H2 finger protein ATL72 gb|AAF19558.1|AC011708_1 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAO44037.1| At3g10910 [Arabidopsis thaliana] dbj|BA 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.26785e-12
C-terminus
sp_v2.0_unigene13763 SustainPine v2.0 931
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.41713e-19
N-terminus
sp_v2.0_unigene13819 SustainPine v2.0 812
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 0.0
Internal
sp_v2.0_unigene13985 SustainPine v2.0 1162
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF23258.1|AC015985_16 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAF23312.1|AC016661_37 unknown protein [Arabidopsis thaliana] gb|AAL66972.1| putative RING zinc finger protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene14083 SustainPine v2.0 669
AutoFact: PHD finger-containing protein [Arabidopsis thaliana] dbj|BAF01725.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF02246.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74631.1| PHD finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein binding protein 0.0
Internal
sp_v2.0_unigene14141 SustainPine v2.0 1696
AutoFact: Myosin_tail_1 multi-domain protein 1.0e-08
FL-Next: sp=MND1-interacting protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring-finger domain-containing protein 0.0
Internal
sp_v2.0_unigene14184 SustainPine v2.0 450
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: cohesin loading factor subunit scc2 2.17201e-43
Internal
sp_v2.0_unigene14187 SustainPine v2.0 395
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs lrr 4.3336e-35
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain