Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11388 SustainPine v2.0 695
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.11636e-15
C-terminus
sp_v2.0_unigene11511 SustainPine v2.0 411
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccr4-not transcription complex subunit 1.16942e-32
Internal
sp_v2.0_unigene11564 SustainPine v2.0 590
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-finger domain-containing protein 0.0
Internal
sp_v2.0_unigene11644 SustainPine v2.0 2111
AutoFact: Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] gb|AEE35529.1| Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane fragile-x-f-associated protein 0.0
Complete
sp_v2.0_unigene11804 SustainPine v2.0 1471
AutoFact: pfam07002, Copine, Copine 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
Putative N-terminus
sp_v2.0_unigene11807 SustainPine v2.0 1030
AutoFact: transcription factor-like protein [Arabidopsis thaliana] gb|AED90905.1| transcription factor-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear transcription x-box 0.0
C-terminus
sp_v2.0_unigene11924 SustainPine v2.0 666
AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene11973 SustainPine v2.0 895
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene12070 SustainPine v2.0 1471
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Complete
sp_v2.0_unigene12081 SustainPine v2.0 557
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Ostreococcus lucimarinus (strain CCE9901). 0.0
Blast2go: preprotein translocase seca-like protein 0.0
Putative N-terminus
sp_v2.0_unigene12155 SustainPine v2.0 426
AutoFact: WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] gb|AEE28390.1| WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: lysine-specific demethylase 3b 1.19392e-39
Internal
sp_v2.0_unigene12208 SustainPine v2.0 536
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42311.1| unknown protein [Arabidopsis thaliana] dbj|BAD95088.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD93876.1| hypothetical protein [Arabidopsis thaliana] gb|AED91256.1| RING/ 8.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.31803e-23
Internal
sp_v2.0_unigene12280 SustainPine v2.0 447
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
FL-Next: sp=Protein translocase subunit SecA; Phaeodactylum tricornutum (strain CCAP 1055/1). Plastid; Chloroplast. 0.0
Blast2go: preprotein translocase seca-like protein 0.0
Putative C-terminus
sp_v2.0_unigene12311 SustainPine v2.0 488
AutoFact: Receptor-like protein kinase (Fragment) n=1 Tax=Glycine max RepID=Q9SEW3_SOYBN 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene12344 SustainPine v2.0 866
AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
sp_v2.0_unigene12421 SustainPine v2.0 993
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100258626 0.0
Putative Complete
sp_v2.0_unigene12476 SustainPine v2.0 1099
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase 0.0
Internal
sp_v2.0_unigene12485 SustainPine v2.0 998
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 0.0
C-terminus
sp_v2.0_unigene12542 SustainPine v2.0 637
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swr1 complex snf2 family dna-dependent atpase 0.0
Putative C-terminus
sp_v2.0_unigene12559 SustainPine v2.0 1553
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain