Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene59666 SustainPine v2.0 250
AutoFact: breast carcinoma amplified sequence 3-like protein [Oryza sativa Japonica Group] 9.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: breast carcinoma amplified 4.04679e-10
Internal
sp_v2.0_unigene59705 SustainPine v2.0 426
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.96148e-31
N-terminus
sp_v2.0_unigene59737 SustainPine v2.0 295
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 4.0e-12
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v2.0_unigene59881 SustainPine v2.0 437
AutoFact: protein denticleless [Arabidopsis thaliana] gb|AAK59671.1| unknown protein [Arabidopsis thaliana] gb|AAL34177.1| unknown protein [Arabidopsis thaliana] gb|AEE77347.1| protein denticleless [Arabidopsis thaliana] 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein denticleless 3.36312e-44
Internal
sp_v2.0_unigene60017 SustainPine v2.0 710
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL09795.1| At1g27840/F28L5_15 [Arabidopsis thaliana] gb|AAL66962.1| unknown protein [Arabidopsis thaliana] gb|AAM20274.1| unknown protein [Arabidopsis thaliana] gb|AEE30881.1| transduci 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd-40 repeat-containing protein 1.88194e-42
N-terminus
sp_v2.0_unigene60145 SustainPine v2.0 721
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 3.0e-20
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.26987e-20
Putative C-terminus
sp_v2.0_unigene60238 SustainPine v2.0 994
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AAL15394.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AEE80389.1| transducin/WD40 domain-containing protein [Arabidopsis thal 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat domain phosphoinositide-interacting protein 0.0
Internal
sp_v2.0_unigene60862 SustainPine v2.0 600
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK25840.1|AF360130_1 unknown protein [Arabidopsis thaliana] gb|AAL47499.1| unknown protein [Arabidopsis thaliana] gb|AEE33283.1| transducin/WD-40 repeat-containing protein [Arabidopsis 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat family protein 2.73816e-31
C-terminus
sp_v2.0_unigene60916 SustainPine v2.0 773
AutoFact: putative cinnamoyl CoA reductase [Arabidopsis thaliana] 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional dihydroflavonol 4-reductase flavanone 4-reductase-like 0.0
Putative N-terminus
sp_v2.0_unigene61135 SustainPine v2.0 742
AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene61208 SustainPine v2.0 711
AutoFact: putative DNA binding protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding post-transcriptional regulator csx1-like 0.0
Internal
sp_v2.0_unigene61335 SustainPine v2.0 1366
AutoFact: protein transport SEC13-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein sec13 homolog 0.0
Complete
sp_v2.0_unigene62167 SustainPine v2.0 500
AutoFact: putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM14874.1| putative WD-40 repeat protein [Arabidopsis thaliana] 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 0.0
Internal
sp_v2.0_unigene62238 SustainPine v2.0 522
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v2.0_unigene62247 SustainPine v2.0 316
AutoFact: Phosphoinositide-3-kinase, regulatory subunit 4, p150 n=2 Tax=Arabidopsis RepID=Q9M0E5_ARATH 1.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v2.0_unigene62420 SustainPine v2.0 1051
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 9.0e-24
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha subunit 1.40673e-26
C-terminus
sp_v2.0_unigene62578 SustainPine v2.0 587
AutoFact: Unassigned protein
FL-Next: tr=Os03g0339100 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein pleiotropic regulatory locus 1-like 2.43741e-07
N-terminus
sp_v2.0_unigene62622 SustainPine v2.0 305
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4H8_RICCO 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100501634 3.94633e-16
C-terminus
sp_v2.0_unigene62643 SustainPine v2.0 530
AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene62681 SustainPine v2.0 476
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] emb|CAB62469.1| kinesin-like protein [Arabidopsis thaliana] gb|AEE78572.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Chromosome-associated kinesin KIF4A, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromosome-associated kinesin 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain