Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene41838 SustainPine v2.0 645
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd40 and beach domain-containing protein 0.0
Internal
sp_v2.0_unigene41867 SustainPine v2.0 287
AutoFact: Cellulose synthase A catalytic subunit 3 [UDP-forming] n=4 Tax=Brassicaceae RepID=CESA3_ARATH 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase catalytic subunit 9.2884e-39
Internal
sp_v2.0_unigene41877 SustainPine v2.0 600
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene41988 SustainPine v2.0 892
AutoFact: PPR domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene42106 SustainPine v2.0 464
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 2.2466e-30
Internal
sp_v2.0_unigene42109 SustainPine v2.0 380
AutoFact: beige-related and WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC06163.1| unknown protein [Arabidopsis thaliana] gb|AEC10567.1| beige-related and WD-40 repeat-containing protein [Arabidopsis thaliana] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: beige-related and wd-40 repeat-containing protein 2.10876e-28
Internal
sp_v2.0_unigene42204 SustainPine v2.0 392
AutoFact: Cleavage stimulation factor 50 n=4 Tax=Arabidopsis RepID=Q8L4J2_ARATH 8.0e-11
FL-Next: tr=Cleavage stimulation factor 50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage stimulation factor 50k chain 3.0638e-12
N-terminus
sp_v2.0_unigene42238 SustainPine v2.0 814
AutoFact: glycine-rich protein [Arabidopsis thaliana] ref|NP_001190893.1| glycine-rich protein [Arabidopsis thaliana] ref|NP_001190894.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86144.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86145.1| glycine-r 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: glycine-rich protein 0.0
Internal
sp_v2.0_unigene42338 SustainPine v2.0 294
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: autophagy 18h-like protein 4.66817e-26
Internal
sp_v2.0_unigene42474 SustainPine v2.0 647
AutoFact: Preprotein translocase secA-like protein n=5 Tax=Arabidopsis thaliana RepID=F4HY36_ARATH 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.82169e-44
C-terminus
sp_v2.0_unigene42833 SustainPine v2.0 427
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Putative N-terminus
sp_v2.0_unigene42851 SustainPine v2.0 319
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RVD7_RICCO 1.0e-34
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 6.78481e-41
Internal
sp_v2.0_unigene42866 SustainPine v2.0 359
AutoFact: Putative mitotic checkpoint protein, 5'-partial (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q84T57_ORYSJ 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 6.01017e-42
C-terminus
sp_v2.0_unigene42998 SustainPine v2.0 530
AutoFact: F-box and wd40 domain protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: stomatal cytokinesis defective scd1 protein 0.0
Internal
sp_v2.0_unigene43057 SustainPine v2.0 383
AutoFact: syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] dbj|BAB11546.1| unnamed protein product [Arabidopsis thaliana] gb|AED90890.1| syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleotide binding 8.05255e-12
N-terminus
sp_v2.0_unigene43109 SustainPine v2.0 505
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAC14498.1| En/Spm-like transposon protein [Arabidopsis thaliana] gb|AAT71958.1| At2g26490 [Arabidopsis thaliana] gb|AAU95436.1| At2g26490 [Arabidopsis thaliana] gb|AEC07844.1| WD40 domain-containin 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: f-box and wd40 domain 6.51604e-43
Internal
sp_v2.0_unigene43304 SustainPine v2.0 536
AutoFact: contains region of similarity to beta transducin family [Arabidopsis thaliana] emb|CAB80889.1| AT4g00800 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
sp_v2.0_unigene43821 SustainPine v2.0 340
AutoFact: breast carcinoma amplified sequence 3-like protein [Oryza sativa Japonica Group] 6.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 5.49283e-13
Internal
sp_v2.0_unigene44472 SustainPine v2.0 266
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 3.0e-32
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: protein translocase subunit chloroplastic-like 8.42394e-39
Internal
sp_v2.0_unigene44473 SustainPine v2.0 701
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain