Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene10770 SustainPine v2.0 2578
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome a-associated f-box protein 0.0
Putative Complete
sp_v2.0_unigene10807 SustainPine v2.0 870
AutoFact: glycine-rich RNA-binding protein [Physcomitrella patens] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10879 SustainPine v2.0 1915
AutoFact: CTC-interacting domain 9 protein [Arabidopsis thaliana] dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 8 protein 0.0
Complete
sp_v2.0_unigene10942 SustainPine v2.0 1639
AutoFact: MEI2-like protein 5 [Arabidopsis thaliana] ref|NP_849727.1| MEI2-like protein 5 [Arabidopsis thaliana] sp|Q8VWF5.1|AML5_ARATH RecName: Full=Protein MEI2-like 5; Short=AML5; AltName: Full=MEI2-like protein 5 gb|AAL32691.1| RNA-binding protein MEI2, putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein mei2-like 4-like 0.0
N-terminus
sp_v2.0_unigene10968 SustainPine v2.0 974
AutoFact: Nonsense-mediated decay UPF3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: regulator of nonsense transcripts 3a 0.0
N-terminus
sp_v2.0_unigene11000 SustainPine v2.0 880
AutoFact: FCA gamma [Pisum sativum] 1.0e-17
FL-Next: Isoform Beta of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein fca-like 1.49858e-21
N-terminus
sp_v2.0_unigene11007 SustainPine v2.0 1621
AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
N-terminus
sp_v2.0_unigene11042 SustainPine v2.0 1144
AutoFact: pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: raffinose synthase-like protein 0.0
Putative C-terminus
sp_v2.0_unigene11098 SustainPine v2.0 595
AutoFact: U2-associated protein SR140 [Arabidopsis thaliana] gb|AAK25922.1|AF360212_1 unknown protein [Arabidopsis thaliana] gb|AAK64118.1| unknown protein [Arabidopsis thaliana] gb|AED93395.1| U2-associated protein SR140 [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.25054e-19
N-terminus
sp_v2.0_unigene11203 SustainPine v2.0 2739
AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene11212 SustainPine v2.0 1696
AutoFact: RRM_1 domain containing protein 6.0e-05
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
C-terminus
sp_v2.0_unigene11511 SustainPine v2.0 411
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccr4-not transcription complex subunit 1.16942e-32
Internal
sp_v2.0_unigene11678 SustainPine v2.0 461
AutoFact: FAP multi-domain protein 2.0e-18
Coding
sp_v2.0_unigene11804 SustainPine v2.0 1471
AutoFact: pfam07002, Copine, Copine 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
Putative N-terminus
sp_v2.0_unigene11811 SustainPine v2.0 1293
AutoFact: Copper ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3E8_RICCO 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine arginine repetitive matrix protein 1 0.0
Internal
sp_v2.0_unigene11973 SustainPine v2.0 895
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene12014 SustainPine v2.0 613
AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AEE30873.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Trifolium repens (Creeping white clover). 0.0
Blast2go: ubiquitin system component cue protein 6.34634e-37
Internal
sp_v2.0_unigene12149 SustainPine v2.0 442
AutoFact: Pentatricopeptide repeat-containing protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9RPX5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene12152 SustainPine v2.0 566
AutoFact: AAA-metalloprotease FtsH [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene12598 SustainPine v2.0 2137
AutoFact: DNA binding protein ACBF-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear acid binding 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain