Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: EGF-like region, conserved site

Term: IPR013032  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene61154 SustainPine v2.0 766
AutoFact: PHD multi-domain protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine-specific demethylase 5d 0.0
N-terminus
sp_v2.0_unigene61157 SustainPine v2.0 594
AutoFact: pfam01439, Metallothio_2, Metallothionein 6.0e-09
Putative coding
sp_v2.0_unigene61341 SustainPine v2.0 1334
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: large subunit ribosomal protein l24e 0.0
Complete
sp_v2.0_unigene61450 SustainPine v2.0 634
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene61492 SustainPine v2.0 1100
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene61712 SustainPine v2.0 638
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 1.0e-36
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 0.0
Blast2go: starch branching enzyme i 3.41917e-43
Putative C-terminus
sp_v2.0_unigene61832 SustainPine v2.0 1025
AutoFact: Pseudotzain n=3 Tax=Pinaceae RepID=Q40922_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine protease 0.0
N-terminus
sp_v2.0_unigene61931 SustainPine v2.0 736
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650 gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 0.0
C-terminus
sp_v2.0_unigene61963 SustainPine v2.0 618
AutoFact: Membrane protein n=1 Tax=Zea mays RepID=B6UFS0_MAIZE 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 2.02306e-13
Complete
sp_v2.0_unigene61994 SustainPine v2.0 583
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TSM0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: early bolting in short days 0.0
Putative C-terminus
sp_v2.0_unigene62064 SustainPine v2.0 598
AutoFact: Pentatricopeptide repeat protein n=1 Tax=Gossypium hirsutum RepID=D2STE6_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene62171 SustainPine v2.0 637
AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AED93254.1| protein kinase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene62204 SustainPine v2.0 642
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic- partial 0.0
Internal
sp_v2.0_unigene62238 SustainPine v2.0 522
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v2.0_unigene62512 SustainPine v2.0 666
AutoFact: Thiol protease aleurain-like n=2 Tax=Arabidopsis thaliana RepID=ALEUL_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiol protease aleurain-like protein 0.0
Internal
sp_v2.0_unigene62701 SustainPine v2.0 901
AutoFact: Coatomer subunit beta-1 n=7 Tax=Poaceae RepID=COPB1_ORYSJ 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
Putative C-terminus
sp_v2.0_unigene62877 SustainPine v2.0 879
AutoFact: WS02786.CR_N22 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02786_N22 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene62882 SustainPine v2.0 642
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650 gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g13650-like 0.0
Putative Complete
sp_v2.0_unigene62913 SustainPine v2.0 523
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene62916 SustainPine v2.0 691
AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9SP66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain