|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene32302
|
SustainPine v2.0
|
341
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
8.0e-22
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
3.41527e-26
|
|
Internal
|
|
sp_v2.0_unigene34712
|
SustainPine v2.0
|
836
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative C-terminus
|
|
sp_v2.0_unigene37195
|
SustainPine v2.0
|
609
|
|
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene38675
|
SustainPine v2.0
|
573
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene42712
|
SustainPine v2.0
|
484
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
4.2039e-45
|
|
Internal
|
|
sp_v2.0_unigene45597
|
SustainPine v2.0
|
679
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
2.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
1.47575e-36
|
|
Internal
|
|
sp_v2.0_unigene46736
|
SustainPine v2.0
|
457
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
1.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
3.78351e-44
|
|
Putative N-terminus
|
|
sp_v2.0_unigene48040
|
SustainPine v2.0
|
421
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
8.0e-35
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
4.2039e-45
|
|
Internal
|
|
sp_v2.0_unigene49144
|
SustainPine v2.0
|
361
|
|
• AutoFact: Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Armillariella tabescens RepID=Q708W0_9AGAR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: glyceraldehyde-3-phosphate dehydrogenase
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene54315
|
SustainPine v2.0
|
383
|
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
2.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
3.37969e-22
|
|
Internal
|
|
sp_v2.0_unigene55110
|
SustainPine v2.0
|
415
|
|
• AutoFact: rve domain containing protein
|
2.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_010605 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene55902
|
SustainPine v2.0
|
539
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
3.0e-40
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene56280
|
SustainPine v2.0
|
246
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-28
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
1.43514e-35
|
|
Internal
|
|
sp_v2.0_unigene56919
|
SustainPine v2.0
|
446
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
2.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
4.42849e-39
|
|
Internal
|
|
sp_v2.0_unigene57279
|
SustainPine v2.0
|
191
|
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q75IK3_ORYSJ
|
8.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
9.73616e-22
|
|
Internal
|
|
sp_v2.0_unigene57982
|
SustainPine v2.0
|
483
|
|
• AutoFact: Enolase n=1 Tax=Schizophyllum commune H4-8 RepID=D8PM07_SCHCM
|
0.0
|
|
• FL-Next: sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: phosphopyruvate hydratase
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene59509
|
SustainPine v2.0
|
790
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene59563
|
SustainPine v2.0
|
598
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera]
|
0.0
|
|
Putative C-terminus
|
|
sp_v2.0_unigene59816
|
SustainPine v2.0
|
348
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
5.0e-26
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
6.89209e-31
|
|
Internal
|
|
sp_v2.0_unigene60052
|
SustainPine v2.0
|
383
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
2.0e-35
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
2.04982e-41
|
|
Internal
|
