Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pseudouridine synthase, RsuA and RluB/C/D/E/F

Term: IPR006145  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene999 SustainPine v2.0 1634
• AutoFact: RNA pseudourine synthase 1 n=1 Tax=Arabidopsis thaliana RepID=PUS1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna pseudourine synthase 1-like 0.0
Complete
sp_v2.0_unigene1855 SustainPine v2.0 1529
• AutoFact: suppressor of variegation1 causing pseudouridine synthase-like protein [Arabidopsis thaliana] gb|AAM66944.1| unknown [Arabidopsis thaliana] dbj|BAC42334.1| unknown protein [Arabidopsis thaliana] gb|AEC09639.1| suppressor of variegation1 causing pseudourid 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene4492 SustainPine v2.0 1681
• AutoFact: RNA pseudourine synthase 5 [Arabidopsis thaliana] sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA pseudourine synthase 5; AltName: Full=RNA pseudouridylate synthase 5; AltName: Full=RNA-uridine isomerase 5 gb|AEE78921.1| RNA pseudourine synthase 5 [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna pseudourine synthase 5 0.0
Complete
sp_v2.0_unigene4779 SustainPine v2.0 2700
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
sp_v2.0_unigene12184 SustainPine v2.0 411
• AutoFact: RNA pseudourine synthase 6 [Arabidopsis thaliana] sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA pseudourine synthase 6, chloroplastic; AltName: Full=RNA pseudouridylate synthase 6; AltName: Full=RNA-uridine isomerase 6; Flags: Precursor emb|CAB36821.1| hypothe 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal pseudouridine 0.0
Internal
sp_v2.0_unigene28346 SustainPine v2.0 1188
• AutoFact: RNA pseudourine synthase 6 [Arabidopsis thaliana] sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA pseudourine synthase 6, chloroplastic; AltName: Full=RNA pseudouridylate synthase 6; AltName: Full=RNA-uridine isomerase 6; Flags: Precursor emb|CAB36821.1| hypothe 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal pseudouridine 0.0
C-terminus
sp_v2.0_unigene29250 SustainPine v2.0 568
• AutoFact: RNA pseudourine synthase 4 [Arabidopsis thaliana] sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA pseudourine synthase 4, mitochondrial; AltName: Full=RNA pseudouridylate synthase 4; AltName: Full=RNA-uridine isomerase 4; Flags: Precursor dbj|BAB02469.1| unnamed 2.0e-37
• FL-Next: sp=RNA pseudourine synthase 4, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna pseudourine synthase mitochondrial-like 0.0
Internal
sp_v2.0_unigene35837 SustainPine v2.0 922
• AutoFact: RNA pseudourine synthase 2 [Arabidopsis thaliana] sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA pseudourine synthase 2, chloroplastic; AltName: Full=RNA pseudouridylate synthase 2; AltName: Full=RNA-uridine isomerase 2; Flags: Precursor gb|AEE35790.1| RNA pseu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna pseudourine synthase chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene36583 SustainPine v2.0 653
• AutoFact: putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] dbj|BAD10435.1| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] 7.00649e-43
• FL-Next: Isoform 2 of RNA pseudourine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 0.0
• Blast2go: rna pseudourine synthase mitochondrial-like 0.0
C-terminus
sp_v2.0_unigene37816 SustainPine v2.0 488
• AutoFact: RNA pseudourine synthase 7 [Arabidopsis thaliana] sp|Q9LU60.1|PUS7_ARATH RecName: Full=RNA pseudourine synthase 7; AltName: Full=RNA pseudouridylate synthase 7; AltName: Full=RNA-uridine isomerase 7 dbj|BAA97376.1| unnamed protein product [Arabidopsis tha 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna pseudourine synthase 7 0.0
Internal
sp_v2.0_unigene38215 SustainPine v2.0 705
• AutoFact: RNA pseudourine synthase 2, chloroplastic n=2 Tax=Oryza sativa RepID=PUS2_ORYSJ 2.8026e-45
• FL-Next: sp=RNA pseudourine synthase 2, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna pseudourine synthase 2 0.0
N-terminus
sp_v2.0_unigene40951 SustainPine v2.0 330
• AutoFact: putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] dbj|BAD10435.1| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] 8.0e-25
• FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna pseudourine synthase mitochondrial-like 6.14441e-31
Internal
sp_v2.0_unigene51455 SustainPine v2.0 375
• AutoFact: RNA pseudourine synthase 7 [Arabidopsis thaliana] sp|Q9LU60.1|PUS7_ARATH RecName: Full=RNA pseudourine synthase 7; AltName: Full=RNA pseudouridylate synthase 7; AltName: Full=RNA-uridine isomerase 7 dbj|BAA97376.1| unnamed protein product [Arabidopsis tha 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna pseudourine synthase 7 5.65714e-36
Internal
sp_v2.0_unigene53196 SustainPine v2.0 626
• AutoFact: isovaleryl-CoA dehydrogenase [Beta vulgaris] 4.0e-31
• FL-Next: sp=Isovaleryl-CoA dehydrogenase, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: isovaleryl- dehydrogenase 1.66615e-31
Internal
sp_v2.0_unigene54342 SustainPine v2.0 277
• AutoFact: RNA pseudourine synthase 3, mitochondrial n=3 Tax=Arabidopsis RepID=PUS3_ARATH 2.0e-22
• FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna pseudourine synthase mitochondrial-like 7.48043e-31
Internal
sp_v2.0_unigene58024 SustainPine v2.0 335
• AutoFact: Isovaleryl-CoA dehydrogenase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NEH1_COPC7 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: isovaleryl coenzyme a dehydrogenase 0.0
C-terminus
sp_v2.0_unigene64785 SustainPine v2.0 370
• AutoFact: RNA pseudourine synthase 3, mitochondrial n=3 Tax=Arabidopsis RepID=PUS3_ARATH 1.0e-20
• FL-Next: Isoform 2 of RNA pseudourine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 0.0
• Blast2go: rna pseudourine synthase mitochondrial-like 1.28388e-24
C-terminus
sp_v2.0_unigene65208 SustainPine v2.0 366
• AutoFact: RNA pseudourine synthase 7 [Arabidopsis thaliana] sp|Q9LU60.1|PUS7_ARATH RecName: Full=RNA pseudourine synthase 7; AltName: Full=RNA pseudouridylate synthase 7; AltName: Full=RNA-uridine isomerase 7 dbj|BAA97376.1| unnamed protein product [Arabidopsis tha 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna pseudourine synthase 7 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain