Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene78993 SustainPine v2.0 760
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Blast2go: alpha-expansin 8 0.0
C-terminus
sp_v2.0_unigene80209 SustainPine v2.0 541
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: expansin 1 5.608e-42
C-terminus
sp_v2.0_unigene80950 SustainPine v2.0 360
AutoFact: putative syntaxin SYP111 (ISS) [Ostreococcus tauri] emb|CAL57055.1| putative syntaxin SYP111 (ISS) [Ostreococcus tauri] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phagocytic receptor 1b-like 0.0
C-terminus
sp_v2.0_unigene81400 SustainPine v2.0 558
AutoFact: Alpha-expansin 15, putative n=1 Tax=Ricinus communis RepID=B9SHI9_RICCO 2.0e-37
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Putative Complete
sp_v2.0_unigene81836 SustainPine v2.0 275
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 8.54792e-44
Putative C-terminus
sp_v2.0_unigene81928 SustainPine v2.0 609
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 0.0
Complete
sp_v2.0_unigene81945 SustainPine v2.0 184
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.25143e-30
C-terminus
sp_v2.0_unigene82339 SustainPine v2.0 344
AutoFact: ANTH domain containing protein 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clathrin assembly protein at2g01600-like isoform 2 3.08072e-11
Internal
sp_v2.0_unigene82844 SustainPine v2.0 564
AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor-1 alpha 1.54254e-40
Putative N-terminus
sp_v2.0_unigene85472 SustainPine v2.0 890
AutoFact: putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 0.0
Internal
sp_v2.0_unigene85769 SustainPine v2.0 295
AutoFact: scarecrow-like transcription factor PAT1 [Arabidopsis thaliana] ref|NP_974903.1| scarecrow-like transcription factor PAT1 [Arabidopsis thaliana] sp|Q9LDL7.1|PAT1_ARATH RecName: Full=Scarecrow-like transcription factor PAT1; AltName: Full=GRAS family prote 2.0e-12
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: chitin-inducible gibberellin-responsive 1.42028e-17
Internal
sp_v2.0_unigene86298 SustainPine v2.0 676
AutoFact: EMP70 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phagocytic receptor 1b-like 0.0
Internal
sp_v2.0_unigene91066 SustainPine v2.0 2492
AutoFact: chloroplast biotin carboxylase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: biotin carboxylase precursor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain