Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene82737 SustainPine v2.0 959
• AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.57331e-43
Putative C-terminus
sp_v2.0_unigene82742 SustainPine v2.0 1160
• AutoFact: Putative DOF zinc finger protein n=1 Tax=Jatropha curcas RepID=D3GA37_9ROSI 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 2.90464e-40
Putative N-terminus
sp_v2.0_unigene82790 SustainPine v2.0 843
• AutoFact: PLAC8 domain containing protein 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene83257 SustainPine v2.0 390
• AutoFact: RVT_2 domain containing protein 2.0e-27
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 6.73647e-22
Internal
sp_v2.0_unigene83352 SustainPine v2.0 479
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 2.27595e-36
Internal
sp_v2.0_unigene83354 SustainPine v2.0 538
• AutoFact: Gag-pol polyprotein, putative [Solanum demissum] 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene83363 SustainPine v2.0 388
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: uncharacterized protein loc100795634 9.50741e-34
Internal
sp_v2.0_unigene83368 SustainPine v2.0 259
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 3.0e-20
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.63176e-26
Internal
sp_v2.0_unigene83376 SustainPine v2.0 731
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 0.0
Internal
sp_v2.0_unigene83380 SustainPine v2.0 321
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 3.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.49367e-26
Internal
sp_v2.0_unigene83382 SustainPine v2.0 305
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 1.0e-18
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.01554e-23
Internal
sp_v2.0_unigene83469 SustainPine v2.0 571
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 1.0e-14
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: retrotransposon unclassified 1.29307e-16
C-terminus
sp_v2.0_unigene83476 SustainPine v2.0 691
• AutoFact: gag-pol polyprotein [Vitis vinifera] 7.0e-22
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: af478377_1gag-pol polyprotein 6.74023e-27
C-terminus
sp_v2.0_unigene83477 SustainPine v2.0 416
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-34
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pol protein integrase region 1.04593e-34
Internal
sp_v2.0_unigene83499 SustainPine v2.0 504
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 9.89962e-32
Internal
sp_v2.0_unigene83510 SustainPine v2.0 429
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 1.0e-14
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 2.17933e-17
C-terminus
sp_v2.0_unigene83512 SustainPine v2.0 549
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-22
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 1.86372e-22
C-terminus
sp_v2.0_unigene83563 SustainPine v2.0 967
• AutoFact: Chromo domain containing protein 0.0001
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene83568 SustainPine v2.0 448
• AutoFact: gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana] 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 5.04168e-38
Internal
sp_v2.0_unigene83571 SustainPine v2.0 423
• AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 9.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 7.93108e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain