Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene78156 SustainPine v2.0 305
AutoFact: Reverse transcriptase (RNA-dependent DNA polymerase), putative n=1 Tax=Medicago truncatula RepID=Q1S5J6_MEDTR 2.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 7.55313e-22
Internal
sp_v2.0_unigene78517 SustainPine v2.0 839
AutoFact: putative dihydroflavonol reductase [Oryza sativa] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional dihydroflavonol 4-reductase flavanone 4-reductase-like isoform 2 0.0
Putative N-terminus
sp_v2.0_unigene78650 SustainPine v2.0 1123
AutoFact: male sterility 2 (MS2) protein [Arabidopsis thaliana] prf||1916413A male sterility 2 gene 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acyl- reductase 2 0.0
Internal
sp_v2.0_unigene78752 SustainPine v2.0 568
AutoFact: Putative cytochrome P450 (Fragment) n=1 Tax=Populus tremula x Populus alba RepID=Q8H224_POPCN 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene78829 SustainPine v2.0 705
AutoFact: Putative tonoplast intrinsic protein n=1 Tax=Camellia sinensis RepID=D3GDK8_CAMSI 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aquaporin tip4-1 0.0
C-terminus
sp_v2.0_unigene78904 SustainPine v2.0 508
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_022356 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene78933 SustainPine v2.0 176
AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.58447e-14
Internal
sp_v2.0_unigene79054 SustainPine v2.0 379
AutoFact: 40S ribosomal protein S19 n=1 Tax=Elaeis guineensis RepID=B3TLL5_ELAGV 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 5.23111e-39
N-terminus
sp_v2.0_unigene79072 SustainPine v2.0 579
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SSS7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: map kinase-like protein 0.0
Internal
sp_v2.0_unigene79132 SustainPine v2.0 319
AutoFact: cyclin-dependent kinases regulatory subunit [Ostreococcus tauri] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 7.13514e-19
N-terminus
sp_v2.0_unigene79228 SustainPine v2.0 307
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_006839 [Vitis vinifera] 6.00004e-24
Internal
sp_v2.0_unigene79275 SustainPine v2.0 535
AutoFact: putative cytochrome P450 [Populus tremula x Populus alba] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene79448 SustainPine v2.0 759
AutoFact: pleckstrin homology and lipid-binding START domain-containing protein [Arabidopsis thaliana] gb|AAL57642.1| AT5g45560/MFC19_23 [Arabidopsis thaliana] gb|AED95268.1| pleckstrin homology and lipid-binding START domain-containing protein [Arabidopsis thalian 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.54826e-28
Putative C-terminus
sp_v2.0_unigene79462 SustainPine v2.0 705
AutoFact: Prolyl 4-hydroxylase alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9RSW4_RICCO 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prolyl 4-hydroxylase alpha subunit-like protein 0.0
C-terminus
sp_v2.0_unigene79567 SustainPine v2.0 780
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100818429 6.36705e-24
C-terminus
sp_v2.0_unigene79613 SustainPine v2.0 300
AutoFact: 40S ribosomal protein S19-1 n=8 Tax=Arabidopsis RepID=RS191_ARATH 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 0.0
C-terminus
sp_v2.0_unigene79769 SustainPine v2.0 386
AutoFact: Cytochrome P450 n=1 Tax=Panax notoginseng RepID=F4YF79_9APIA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flavonoid 3 -monooxygenase-like 0.0
Internal
sp_v2.0_unigene79911 SustainPine v2.0 631
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene79957 SustainPine v2.0 703
AutoFact: putative proline synthetase associated protein [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proline synthase co-transcribed bacterial homolog 0.0
Putative N-terminus
sp_v2.0_unigene80058 SustainPine v2.0 677
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11599.1|AF424605_1 AT4g31450/F3L17_20 [Arabidopsis thaliana] gb|AAN73297.1| At4g31450/F3L17_20 [Arabidopsis thaliana] gb|AEE85915.1| RING/U-box domain-containing protein [Arabidopsis thalia 3.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 5.60519e-44
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain