Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene76623 SustainPine v2.0 338
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 7.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 1.49448e-25
Internal
sp_v2.0_unigene76693 SustainPine v2.0 415
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ZRJ9_GINBI 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: reverse transcriptase 9.14588e-12
Internal
sp_v2.0_unigene76712 SustainPine v2.0 387
• AutoFact: Putative polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6F2D6_SOLDE 7.0e-31
• FL-Next: tr=Putative polyprotein, identical; Solanum demissum (Wild potato). 0.0
• Blast2go: retrotransposon protein 1.58637e-35
Internal
sp_v2.0_unigene76713 SustainPine v2.0 366
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 8.31008e-23
Putative N-terminus
sp_v2.0_unigene76942 SustainPine v2.0 693
• AutoFact: Flavonoid 3-monooxygenase n=3 Tax=Andropogoneae RepID=B6SSX8_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene77006 SustainPine v2.0 947
• AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
• FL-Next: sp=Cytochrome P450 750A1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
C-terminus
sp_v2.0_unigene77049 SustainPine v2.0 637
• AutoFact: quinone oxidoreductase-like protein [Arabidopsis thaliana] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 2-alkenal reductase 1.68156e-44
C-terminus
sp_v2.0_unigene77080 SustainPine v2.0 410
• AutoFact: rve domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 5.5838e-40
Internal
sp_v2.0_unigene77121 SustainPine v2.0 308
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: hypothetical protein VITISV_043102 [Vitis vinifera] 4.09993e-22
Internal
sp_v2.0_unigene77231 SustainPine v2.0 517
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 1.4013e-45
N-terminus
sp_v2.0_unigene77323 SustainPine v2.0 518
• AutoFact: Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001030794.1| Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001078222.1| Ninja-family protein AFP3 [Arabidopsis thaliana] sp|Q94F39.1|AFP3_ARATH RecName: Full=Ninja-family protein AFP3; AltN 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ninja-family protein afp3 7.75095e-28
Putative Complete
sp_v2.0_unigene77458 SustainPine v2.0 418
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene77680 SustainPine v2.0 583
• AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ 1.4013e-45
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene77816 SustainPine v2.0 384
• AutoFact: DUF659 domain containing protein 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized protein loc100793012 2.01032e-26
Putative C-terminus
sp_v2.0_unigene77905 SustainPine v2.0 644
• AutoFact: Cinnamyl alcohol dehydrogenase n=1 Tax=Elaeis guineensis RepID=B3TLU8_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cinnamyl alcohol dehydrogenase 0.0
N-terminus
sp_v2.0_unigene77919 SustainPine v2.0 277
• AutoFact: cyclin-dependent kinases regulatory subunit [Glycine max] gb|ACU14766.1| unknown [Glycine max] 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinases regulatory subunit 5.52503e-22
Putative N-terminus
sp_v2.0_unigene78029 SustainPine v2.0 338
• AutoFact: RVT_2 domain containing protein 1.0e-21
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: hypothetical protein VITISV_032634 [Vitis vinifera] 7.78368e-24
Internal
sp_v2.0_unigene78053 SustainPine v2.0 323
• AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 4.64832e-24
Internal
sp_v2.0_unigene78057 SustainPine v2.0 217
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QSC4_ORYSJ 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 1.20604e-11
Internal
sp_v2.0_unigene78117 SustainPine v2.0 461
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hypothetical protein VITISV_007301 [Vitis vinifera] 3.59662e-25
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain