Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene70391 SustainPine v2.0 498
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty1-copia subclass 3.14632e-33
Internal
sp_v2.0_unigene70404 SustainPine v2.0 278
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase family protein 4.60787e-23
Internal
sp_v2.0_unigene70410 SustainPine v2.0 533
• AutoFact: phospholipid-translocating ATPase [Arabidopsis thaliana] sp|Q9LK90.1|ALA8_ARATH RecName: Full=Putative phospholipid-transporting ATPase 8; Short=AtALA8; AltName: Full=Aminophospholipid flippase 8 dbj|BAB02533.1| P-type transporting ATPase-like protein [Ar 0.0
• FL-Next: sp=Putative phospholipid-transporting ATPase 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: phospholipid-transporting atpase 9-like 0.0
Internal
sp_v2.0_unigene70497 SustainPine v2.0 327
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R919_RICCO 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 3.1127e-41
Internal
sp_v2.0_unigene70577 SustainPine v2.0 302
• AutoFact: GK15001 n=1 Tax=Drosophila willistoni RepID=B4MVS9_DROWI 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 6.34124e-18
Internal
sp_v2.0_unigene70722 SustainPine v2.0 328
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 2.1619e-24
C-terminus
sp_v2.0_unigene70729 SustainPine v2.0 430
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 1.25067e-30
Internal
sp_v2.0_unigene70753 SustainPine v2.0 311
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.93998e-20
Internal
sp_v2.0_unigene70900 SustainPine v2.0 359
• AutoFact: Aquaporin n=2 Tax=Helianthus annuus RepID=Q39957_HELAN 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: delta tonoplast intrinsic protein 1.14895e-28
N-terminus
sp_v2.0_unigene70943 SustainPine v2.0 298
• AutoFact: rve domain containing protein 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 3.98257e-27
Internal
sp_v2.0_unigene70959 SustainPine v2.0 279
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ARL0_GINBI 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 7.74644e-22
Internal
sp_v2.0_unigene71084 SustainPine v2.0 262
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: af378049_1reverse transcriptase 1.08763e-30
Putative Complete
sp_v2.0_unigene71254 SustainPine v2.0 357
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon like protein 0.0
C-terminus
sp_v2.0_unigene71265 SustainPine v2.0 346
• AutoFact: DUF3339 domain containing protein 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.36055e-20
Complete
sp_v2.0_unigene71402 SustainPine v2.0 299
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y0_RICCO 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dna binding 2.74428e-16
C-terminus
sp_v2.0_unigene71429 SustainPine v2.0 271
• AutoFact: RVT_1 domain containing protein 3.0e-10
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 8.96781e-34
Putative N-terminus
sp_v2.0_unigene71516 SustainPine v2.0 336
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.35611e-33
Internal
sp_v2.0_unigene71635 SustainPine v2.0 399
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene72153 SustainPine v2.0 323
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.1108e-37
Internal
sp_v2.0_unigene72211 SustainPine v2.0 425
• AutoFact: ABC transporter family, pleiotropic drug resistance protein n=1 Tax=Populus trichocarpa RepID=B9GGM3_POPTR 0.0
• FL-Next: sp=Pleiotropic drug resistance protein TUR2; Spirodela polyrrhiza (Giant duckweed). 0.0
• Blast2go: pleiotropic drug resistance protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain