Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67517 SustainPine v2.0 312
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] ref|NP_001030665.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAF23299.1|AC016661_24 unknown protein [Arabidopsis thaliana] gb|AAS55571.1| At3g09690 [Arab 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.32943e-15
Internal
sp_v2.0_unigene67862 SustainPine v2.0 283
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854191 2.09151e-18
Putative C-terminus
sp_v2.0_unigene67868 SustainPine v2.0 289
AutoFact: pfam13001, Ecm29, Proteasome stabiliser 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: proteasome-associated protein ecm29 homolog 1.05053e-30
Internal
sp_v2.0_unigene67950 SustainPine v2.0 450
AutoFact: Protein argonaute 1A n=3 Tax=Oryza sativa RepID=AGO1A_ORYSJ 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 0.0
Internal
sp_v2.0_unigene68182 SustainPine v2.0 381
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 4.18805e-33
Internal
sp_v2.0_unigene68432 SustainPine v2.0 371
AutoFact: [TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family 5.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: transformation transcription domain-associated protein 1.62622e-39
Internal
sp_v2.0_unigene68481 SustainPine v2.0 304
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.62624e-24
Internal
sp_v2.0_unigene68560 SustainPine v2.0 389
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 2.6263e-21
Internal
sp_v2.0_unigene68657 SustainPine v2.0 289
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q5W6T2_ORYSJ 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.76222e-20
Internal
sp_v2.0_unigene68789 SustainPine v2.0 380
AutoFact: Adenylate kinase 1, putative n=1 Tax=Ricinus communis RepID=B9RMJ0_RICCO 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenylate kinase b 1.31077e-22
Putative N-terminus
sp_v2.0_unigene68842 SustainPine v2.0 385
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.71458e-36
Internal
sp_v2.0_unigene68882 SustainPine v2.0 700
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHW1_RICCO 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
sp_v2.0_unigene69025 SustainPine v2.0 427
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome partial 0.0
Putative N-terminus
sp_v2.0_unigene69253 SustainPine v2.0 336
AutoFact: reverse transcriptase [Ginkgo biloba] 8.0e-35
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 8.40779e-45
Putative C-terminus
sp_v2.0_unigene69554 SustainPine v2.0 406
AutoFact: Carbohydrate oxidase n=1 Tax=Helianthus annuus RepID=Q8SA59_HELAN 1.0e-26
FL-Next: sp=Reticuline oxidase; Papaver somniferum (Opium poppy). 0.0
Blast2go: reticuline oxidase-like 3.80288e-33
Internal
sp_v2.0_unigene69625 SustainPine v2.0 544
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: af478370_1gag-pol polyprotein 1.4013e-45
C-terminus
sp_v2.0_unigene69649 SustainPine v2.0 474
AutoFact: [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl jasmonate esterase 0.0
N-terminus
sp_v2.0_unigene69774 SustainPine v2.0 456
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein binding 8.13557e-18
Internal
sp_v2.0_unigene69856 SustainPine v2.0 391
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100854181 1.83806e-38
Putative N-terminus
sp_v2.0_unigene70351 SustainPine v2.0 392
AutoFact: [R] COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase l inhibitor-like protein 4.32312e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain