Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene65943 SustainPine v2.0 764
AutoFact: pfam09368, Sas10_Utp3_C, Sas10 C-terminal domain 2.0e-12
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: something about silencing protein 4.01826e-22
C-terminus
sp_v2.0_unigene66018 SustainPine v2.0 427
AutoFact: CKS1 protein n=3 Tax=Populus RepID=Q8GZU5_9ROSI 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 9.62546e-15
C-terminus
sp_v2.0_unigene66064 SustainPine v2.0 483
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100258643 1.33461e-27
C-terminus
sp_v2.0_unigene66152 SustainPine v2.0 492
AutoFact: RVT_1 domain containing protein 2.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene66264 SustainPine v2.0 508
AutoFact: serine/threonine-protein kinase Nek5 [Arabidopsis thaliana] sp|Q0WPH8.1|NEK5_ARATH RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; Short=AtNEK6; Short=AtNek5 dbj|BAF00971.1| protein kinase like protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
sp_v2.0_unigene66274 SustainPine v2.0 492
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8SJZ1_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Putative C-terminus
sp_v2.0_unigene66321 SustainPine v2.0 500
AutoFact: ramosa 2 [Sorghum bicolor] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene66341 SustainPine v2.0 489
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.74041e-42
Internal
sp_v2.0_unigene66545 SustainPine v2.0 628
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Solanum lycopersicum RepID=Q9FR51_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase protein a 0.0
N-terminus
sp_v2.0_unigene66555 SustainPine v2.0 225
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Medicago truncatula RepID=A2Q5V4_MEDTR 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 6.97311e-15
Internal
sp_v2.0_unigene66558 SustainPine v2.0 369
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-30
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 8.94806e-30
Internal
sp_v2.0_unigene66640 SustainPine v2.0 558
AutoFact: RNase L inhibitor-like protein [Arabidopsis thaliana] emb|CAB78923.1| RNase L inhibitor-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase l inhibitor-like protein 0.0
N-terminus
sp_v2.0_unigene66756 SustainPine v2.0 350
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 5.69106e-27
Internal
sp_v2.0_unigene66969 SustainPine v2.0 370
AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain protein 1.38522e-29
N-terminus
sp_v2.0_unigene67015 SustainPine v2.0 337
AutoFact: Polyprotein, putative [Solanum demissum] 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 7.90704e-21
Internal
sp_v2.0_unigene67217 SustainPine v2.0 474
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 12-like 0.0
Internal
sp_v2.0_unigene67237 SustainPine v2.0 317
AutoFact: GK15001 n=1 Tax=Drosophila willistoni RepID=B4MVS9_DROWI 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 9.99555e-25
Internal
sp_v2.0_unigene67242 SustainPine v2.0 465
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 2.76797e-32
C-terminus
sp_v2.0_unigene67367 SustainPine v2.0 452
AutoFact: Cyclin-dependent kinases regulatory subunit n=2 Tax=Ostreococcus RepID=Q5SCA8_OSTTA 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 2.47635e-40
N-terminus
sp_v2.0_unigene67480 SustainPine v2.0 323
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna 1.28505e-38
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain