Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene63440 SustainPine v2.0 541
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.50829e-41
Putative N-terminus
sp_v2.0_unigene63739 SustainPine v2.0 640
• AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 0.0
• FL-Next: tr=Aquaporin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: mip tip subfamily 0.0
C-terminus
sp_v2.0_unigene63781 SustainPine v2.0 588
• AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9T4J8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Putative C-terminus
sp_v2.0_unigene63820 SustainPine v2.0 503
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lob domain-containing protein 1-like 0.0
Putative N-terminus
sp_v2.0_unigene63830 SustainPine v2.0 555
• AutoFact: Adenylate kinase B n=8 Tax=Magnoliophyta RepID=KAD2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adenylate kinase b 0.0
N-terminus
sp_v2.0_unigene63886 SustainPine v2.0 725
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene64089 SustainPine v2.0 713
• AutoFact: cytochrome P450 [Pyrus communis] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene64192 SustainPine v2.0 550
• AutoFact: Rnase h, putative n=1 Tax=Ricinus communis RepID=B9S2M9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small rna degrading nuclease 5-like 0.0
Internal
sp_v2.0_unigene64252 SustainPine v2.0 506
• AutoFact: Allyl alcohol dehydrogenase n=1 Tax=Nicotiana tabacum RepID=Q9SLN8_TOBAC 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadp-dependent alkenal double bond reductase p2 0.0
N-terminus
sp_v2.0_unigene64657 SustainPine v2.0 500
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene64687 SustainPine v2.0 791
• AutoFact: DUF659 domain containing protein 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 4.2039e-45
Putative Complete
sp_v2.0_unigene64766 SustainPine v2.0 526
• AutoFact: Dihydroflavonal-4-reductase 2 n=2 Tax=Medicago truncatula RepID=Q6TQT0_MEDTR 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dihydroflavonol 4-reductase 8.68805e-44
Putative N-terminus
sp_v2.0_unigene64835 SustainPine v2.0 448
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: disease resistance protein 1.14123e-36
C-terminus
sp_v2.0_unigene64898 SustainPine v2.0 345
• AutoFact: CCAAT-box transcription factor complex WHAP2 [Triticum aestivum] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.27134e-36
Internal
sp_v2.0_unigene65017 SustainPine v2.0 449
• AutoFact: putative fatty acyl-CoA reductase 4 [Arabidopsis thaliana] sp|Q9LXN3.1|FACR4_ARATH RecName: Full=Probable fatty acyl-CoA reductase 4 emb|CAB88536.1| acyl CoA reductase-protein [Arabidopsis thaliana] gb|AEE77912.1| putative fatty acyl-CoA reductase 4 [Arab 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fatty acyl- reductase 4 0.0
Internal
sp_v2.0_unigene65066 SustainPine v2.0 383
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 0.0
Internal
sp_v2.0_unigene65131 SustainPine v2.0 288
• AutoFact: RVT_2 domain containing protein 4.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: hypothetical protein VITISV_028342 [Vitis vinifera] 1.91795e-25
Internal
sp_v2.0_unigene65254 SustainPine v2.0 377
• AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 1.0e-21
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: copia partial 1.23664e-24
Putative C-terminus
sp_v2.0_unigene65376 SustainPine v2.0 297
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 1.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon unclassified 1.03321e-32
Putative C-terminus
sp_v2.0_unigene65779 SustainPine v2.0 430
• AutoFact: Pollen major allergen No.121 isoform 2 n=1 Tax=Cryptomeria japonica RepID=Q588B9_CRYJA 0.0
• FL-Next: tr=Pollen major allergen No.121 isoform 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Blast2go: xyloglucan endotransglucosylase hydrolase protein a 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain