Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene25804 SustainPine v2.0 773
AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
N-terminus
sp_v2.0_unigene25850 SustainPine v2.0 2213
AutoFact: pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sodium calcium exchanger family protein 0.0
Complete
sp_v2.0_unigene25879 SustainPine v2.0 1009
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
Putative C-terminus
sp_v2.0_unigene25893 SustainPine v2.0 1048
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SC17_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
sp_v2.0_unigene25903 SustainPine v2.0 2563
AutoFact: Cucumisin, putative n=1 Tax=Ricinus communis RepID=B9SRB6_RICCO 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene26017 SustainPine v2.0 649
AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NtPDR1 dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 0.0
Internal
sp_v2.0_unigene26140 SustainPine v2.0 1595
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
C-terminus
sp_v2.0_unigene26149 SustainPine v2.0 1699
AutoFact: [K] COG5224 CCAAT-binding factor, subunit B 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a- 0.0
C-terminus
sp_v2.0_unigene26260 SustainPine v2.0 681
AutoFact: DUF1336 domain containing protein 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: unknown [Zea mays] 1.93654e-07
Putative N-terminus
sp_v2.0_unigene26405 SustainPine v2.0 352
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ3_RICCO 2.0e-40
FL-Next: sp=ABC transporter G family member 34; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-binding cassette 0.0
Internal
sp_v2.0_unigene26500 SustainPine v2.0 626
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.19639e-31
Putative C-terminus
sp_v2.0_unigene26526 SustainPine v2.0 2678
AutoFact: DNA replication licensing factor MCM3 homolog 1 n=9 Tax=Poaceae RepID=MCM31_MAIZE 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Blast2go: dna replication licensing factor mcm3 homolog 1-like 0.0
Complete
sp_v2.0_unigene26741 SustainPine v2.0 349
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.96182e-44
Putative Complete
sp_v2.0_unigene26785 SustainPine v2.0 570
AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 0.0
FL-Next: tr=Aquaporin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: mip tip subfamily 0.0
C-terminus
sp_v2.0_unigene26796 SustainPine v2.0 2136
AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK32768.1|AF361600_1 AT5g02970/F9G14_280 [Arabidopsis thaliana] emb|CAB86051.1| putative protein [Arabidopsis thaliana] gb|AAP21157.1| At5g02970/F9G14_280 [Arabidopsis thaliana] gb|AED90 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha beta fold family protein 0.0
Putative Complete
sp_v2.0_unigene26920 SustainPine v2.0 412
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: laccase 90a 0.0
Internal
sp_v2.0_unigene26939 SustainPine v2.0 817
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene26987 SustainPine v2.0 927
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100854191 0.0
Putative Complete
sp_v2.0_unigene27012 SustainPine v2.0 554
AutoFact: Caffeoyl-CoA O-methyltransferase n=8 Tax=Pinaceae RepID=CAMT_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeoyl o-methyltransferase 0.0
Putative N-terminus
sp_v2.0_unigene27128 SustainPine v2.0 1543
AutoFact: nuclear transcription factor Y subunit A-7 [Arabidopsis thaliana] gb|AEE31233.1| nuclear transcription factor Y subunit A-7 [Arabidopsis thaliana] 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain