Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene21919 SustainPine v2.0 909
• AutoFact: LOB domain-containing protein 15 [Arabidopsis thaliana] sp|Q8L5T5.2|LBD15_ARATH RecName: Full=LOB domain-containing protein 15; AltName: Full=ASYMMETRIC LEAVES 2-like protein 11; Short=AS2-like protein 11 gb|AAL38034.1|AF447889_1 LOB DOMAIN 15 [Arabidopsi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lob domain-containing protein 0.0
N-terminus
sp_v2.0_unigene22053 SustainPine v2.0 1046
• AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|Q9M9A5.1|PCR6_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 6; Short=AtPCR6 gb|AAF69715.1|AC016041_20 F27J15.18 [Arabidopsis thaliana] gb|AAR24706.1| At1g49030 [Arabidopsis thaliana] gb|AAS47652.1| At1 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.4013e-45
Complete
sp_v2.0_unigene22545 SustainPine v2.0 729
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_90.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7T812_VITVI 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proline synthetase associated 0.0
N-terminus
sp_v2.0_unigene22581 SustainPine v2.0 3139
• AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: sucrose synthase 0.0
Complete
sp_v2.0_unigene22844 SustainPine v2.0 1668
• AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tropinone reductase homolog at1g07440 0.0
Complete
sp_v2.0_unigene22987 SustainPine v2.0 397
• AutoFact: xyloglucan endotransglycosylase/hydrolase precursor XTH-39 [Populus tremula] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable xyloglucan endotransglucosylase hydrolase protein 28-like 0.0
Internal
sp_v2.0_unigene23101 SustainPine v2.0 2752
• AutoFact: Subtilisin-like serine protease n=5 Tax=Arabidopsis RepID=Q8LGA0_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Complete
sp_v2.0_unigene23475 SustainPine v2.0 643
• AutoFact: DUF659 domain containing protein 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100255241 6.21983e-22
Putative Complete
sp_v2.0_unigene23542 SustainPine v2.0 3265
• AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Complete
sp_v2.0_unigene23627 SustainPine v2.0 1199
• AutoFact: rve domain containing protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol identical 0.0
N-terminus
sp_v2.0_unigene23924 SustainPine v2.0 2061
• AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: sucrose synthase 0.0
C-terminus
sp_v2.0_unigene23930 SustainPine v2.0 1425
• AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4B8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lob domain-containing protein 0.0
Complete
sp_v2.0_unigene23961 SustainPine v2.0 979
• AutoFact: Caffeoyl-CoA O-methyltransferase n=1 Tax=Chamaecyparis obtusa var. formosana RepID=A0S6W3_CHAOB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: caffeoyl- o-methyltransferase 0.0
C-terminus
sp_v2.0_unigene23970 SustainPine v2.0 468
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 1.99965e-42
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
C-terminus
sp_v2.0_unigene24416 SustainPine v2.0 890
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 9.0e-21
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 3.50465e-23
C-terminus
sp_v2.0_unigene24572 SustainPine v2.0 351
• AutoFact: Pol polyprotein n=1 Tax=Citrus x paradisi RepID=Q94FM1_CITPA 2.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 1.19247e-29
C-terminus
sp_v2.0_unigene24573 SustainPine v2.0 2938
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Complete
sp_v2.0_unigene24580 SustainPine v2.0 804
• AutoFact: Polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8W153_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
N-terminus
sp_v2.0_unigene24586 SustainPine v2.0 1555
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
N-terminus
sp_v2.0_unigene24652 SustainPine v2.0 2393
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain